Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq48204 280 3e-73 seq5165 172 1e-40 seq1223 150 4e-34 seq140972 104 5e-20 seq89015 96.9 7e-18 >seq48204 Length=5524 Score = 280 bits (310), Expect = 3e-73 Identities = 250/309 (81%), Gaps = 7/309 (2%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||||| ||||||||||| || | ||||||||||||||| ||||||||||||||||||||| Sbjct 5129 GGCGTTGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 5188 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 ||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||||| | Sbjct 5189 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGGTCACCCTCTCAGGCCGGCTACCCGT 5248 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 ||||| ||||||| || |||| ||||||||| | || || |||||||||| |||| | | Sbjct 5249 CGTCGCCTTGGTGAGCCATTACCTCACCAACAAGCTGATAGGCCGCGAGCTCATCCCTGA 5308 Query 181 GCGATAAATCTTTGGTCAAAGAAT---GATGCCATCCTCTGACATTATGCGGTATTAGCG 237 ||| | ||||| ||| || |||||| | ||| | ||| ||||||||| Sbjct 5309 CCGA-AGTTCTTT--CCAACCGATGCAGATGCC-TGCTCGGCTCGTATCCGGTATTAGAC 5364 Query 238 TTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTC 297 |||||||||| |||| ||| | | ||||| ||||||||||||||||||||||| Sbjct 5365 GTCGTTTCCAACGCTTATCCCAGAGTCAGGGGCAGATTGCTCACGTGTTACTCACCCGTT 5424 Query 298 CGCCACTAA 306 ||||||||| Sbjct 5425 CGCCACTAA 5433 >seq5165 Length=98167 Score = 172 bits (190), Expect = 1e-40 Identities = 247/345 (72%), Gaps = 21/345 (6%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||||| |||| |||||||| |||||| ||||||||||||||||||||| Sbjct 34446 GGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 34387 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||| ||||||| ||| |||||| | ||| |||||||| | |||| ||| Sbjct 34386 GAGTCTGGACCGTATCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGATCAGCTATAGAT 34327 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | | | |||||| || ||| ||||||||||| |||||| || ||||| | Sbjct 34326 CATTGTCTTGGTAAGCCTTTACCTCACCAACTAACTAATCTAATATAGGCTCATCTAATA 34267 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 || |||||| ||| || | | | | ||| ||||||||| | Sbjct 34266 GCAATAAATTTTT---------------CCCCCGTAGGGC-GTATACGGTATTAGTTGCC 34223 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 |||||||| ||||||| || ||| || || || | ||||||||||||| || Sbjct 34222 GTTTCCAACAATTATTCCGTACTACTAGGTAGATTCCT-ATACATTACTCACCCGTCTGC 34164 Query 301 CACTAAGCTATA-TATCCAGCAAGCTTTCAACATAGCTCCGTTCG 344 ||||||| |||| || ||||||| | || ||| ||||||||| Sbjct 34163 CACTAAGTTATACCAT--AGCAAGC-TAAAATATAACTCCGTTCG 34122 >seq1223 Length=197574 Score = 150 bits (166), Expect = 4e-34 Identities = 149/193 (77%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| |||| || | |||||| |||||| || |||||||||||||||||| Sbjct 258 GGCATGGCTGGTTCAGACTTCCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 199 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120 |||||||| |||||||||||| ||| ||||| | || |||||||| | ||||| || Sbjct 198 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCTCCCTCTCAGGACCCCTACCCAT 139 Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 | ||| |||||| || ||| || |||||||| ||||| || ||| || |||||| | Sbjct 138 CATCGTCTTGGTAAGCCGTTACCTTACCAACTAACTAATGGGACGCATGCTCATCTTATA 79 Query 181 GCGATAAATCTTT 193 | |||||||||| Sbjct 78 CCAATAAATCTTT 66 >seq140972 Length=1238 Score = 104 bits (114), Expect = 5e-20 Identities = 138/190 (73%), Gaps = 10/190 (5%) Strand=Plus/Plus Query 8 CTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTG 67 ||| |||| | |||| |||||||| |||||| || |||||||| | | ||| ||| Sbjct 846 CTGGATCAAGCTTTCGCCCATTGTCCAATATTCCTCACTGCTGGC------AAGAGCCTG 899 Query 68 GGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGC 127 |||| | ||||||||||| |||||| | ||| |||||| | ||| |||| ||||| Sbjct 900 GGCCTTATCTCAGTCCCAGTGTGGCTGATCATTCTCTCAAATCAACTAAGGATCATCGGC 959 Query 128 TTGGTGGGCTATTATCTCACCAACTACC-TAATCGGCCGCGAGCCCATCTTTCAGCGATA 186 ||| | ||| ||| || ||||||||| ||||| | ||| |||||| | ||||| Sbjct 960 TTGTTAAGCTTTTACCTTTCCAACTACCTTAATCCTATACAAGCTCATCTTATAACGATA 1019 Query 187 ---AATCTTT 193 ||||||| Sbjct 1020 GTTAATCTTT 1029 >seq89015 Length=3127 Score = 96.9 bits (106), Expect = 7e-18 Identities = 76/91 (84%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60 ||| | |||| ||||| | || ||||||| |||||| ||| ||||||||||||||||| Sbjct 3033 GGCATGGCTGGGTCAGGCTCTCGCCCATTGCCCAATATTCCCTACTGCTGCCTCCCGTAG 3092 Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGG 91 |||||||| |||| ||||||| ||| ||||| Sbjct 3093 GAGTCTGGCCCGTATCTCAGTGCCAGTGTGG 3123 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 996600523776