Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01001432.1
Length=344
Score E
Sequences producing significant alignments: (Bits) Value
seq48204 280 3e-73
seq5165 172 1e-40
seq1223 150 4e-34
seq140972 104 5e-20
seq89015 96.9 7e-18
>seq48204
Length=5524
Score = 280 bits (310), Expect = 3e-73
Identities = 250/309 (81%), Gaps = 7/309 (2%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||||| ||||||||||| || | ||||||||||||||| |||||||||||||||||||||
Sbjct 5129 GGCGTTGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTGCTGCCTCCCGTAG 5188
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
||||||||||||||||||||||||| |||||||| ||| |||||||| ||||||||| |
Sbjct 5189 GAGTCTGGGCCGTGTCTCAGTCCCAGTGTGGCCGGTCACCCTCTCAGGCCGGCTACCCGT 5248
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
||||| ||||||| || |||| ||||||||| | || || |||||||||| |||| | |
Sbjct 5249 CGTCGCCTTGGTGAGCCATTACCTCACCAACAAGCTGATAGGCCGCGAGCTCATCCCTGA 5308
Query 181 GCGATAAATCTTTGGTCAAAGAAT---GATGCCATCCTCTGACATTATGCGGTATTAGCG 237
||| | ||||| ||| || |||||| | ||| | ||| |||||||||
Sbjct 5309 CCGA-AGTTCTTT--CCAACCGATGCAGATGCC-TGCTCGGCTCGTATCCGGTATTAGAC 5364
Query 238 TTCGTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTC 297
|||||||||| |||| ||| | | ||||| |||||||||||||||||||||||
Sbjct 5365 GTCGTTTCCAACGCTTATCCCAGAGTCAGGGGCAGATTGCTCACGTGTTACTCACCCGTT 5424
Query 298 CGCCACTAA 306
|||||||||
Sbjct 5425 CGCCACTAA 5433
>seq5165
Length=98167
Score = 172 bits (190), Expect = 1e-40
Identities = 247/345 (72%), Gaps = 21/345 (6%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | |||| |||||| |||| |||||||| |||||| |||||||||||||||||||||
Sbjct 34446 GGCATGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCCCACTGCTGCCTCCCGTAG 34387
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||||||| |||| ||||||| ||| |||||| | ||| |||||||| | |||| |||
Sbjct 34386 GAGTCTGGACCGTATCTCAGTTCCAGTGTGGCTGATCATCCTCTCAGATCAGCTATAGAT 34327
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
| | | |||||| || ||| ||||||||||| |||||| || ||||| |
Sbjct 34326 CATTGTCTTGGTAAGCCTTTACCTCACCAACTAACTAATCTAATATAGGCTCATCTAATA 34267
Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240
|| |||||| ||| || | | | | ||| ||||||||| |
Sbjct 34266 GCAATAAATTTTT---------------CCCCCGTAGGGC-GTATACGGTATTAGTTGCC 34223
Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300
|||||||| ||||||| || ||| || || || | ||||||||||||| ||
Sbjct 34222 GTTTCCAACAATTATTCCGTACTACTAGGTAGATTCCT-ATACATTACTCACCCGTCTGC 34164
Query 301 CACTAAGCTATA-TATCCAGCAAGCTTTCAACATAGCTCCGTTCG 344
||||||| |||| || ||||||| | || ||| |||||||||
Sbjct 34163 CACTAAGTTATACCAT--AGCAAGC-TAAAATATAACTCCGTTCG 34122
>seq1223
Length=197574
Score = 150 bits (166), Expect = 4e-34
Identities = 149/193 (77%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | |||| |||| || | |||||| |||||| || ||||||||||||||||||
Sbjct 258 GGCATGGCTGGTTCAGACTTCCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 199
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGAT 120
|||||||| |||||||||||| ||| ||||| | || |||||||| | ||||| ||
Sbjct 198 GAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCTCCCTCTCAGGACCCCTACCCAT 139
Query 121 CGTCGGCTTGGTGGGCTATTATCTCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180
| ||| |||||| || ||| || |||||||| ||||| || ||| || |||||| |
Sbjct 138 CATCGTCTTGGTAAGCCGTTACCTTACCAACTAACTAATGGGACGCATGCTCATCTTATA 79
Query 181 GCGATAAATCTTT 193
| ||||||||||
Sbjct 78 CCAATAAATCTTT 66
>seq140972
Length=1238
Score = 104 bits (114), Expect = 5e-20
Identities = 138/190 (73%), Gaps = 10/190 (5%)
Strand=Plus/Plus
Query 8 CTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCTG 67
||| |||| | |||| |||||||| |||||| || |||||||| | | ||| |||
Sbjct 846 CTGGATCAAGCTTTCGCCCATTGTCCAATATTCCTCACTGCTGGC------AAGAGCCTG 899
Query 68 GGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGGC 127
|||| | ||||||||||| |||||| | ||| |||||| | ||| |||| |||||
Sbjct 900 GGCCTTATCTCAGTCCCAGTGTGGCTGATCATTCTCTCAAATCAACTAAGGATCATCGGC 959
Query 128 TTGGTGGGCTATTATCTCACCAACTACC-TAATCGGCCGCGAGCCCATCTTTCAGCGATA 186
||| | ||| ||| || ||||||||| ||||| | ||| |||||| | |||||
Sbjct 960 TTGTTAAGCTTTTACCTTTCCAACTACCTTAATCCTATACAAGCTCATCTTATAACGATA 1019
Query 187 ---AATCTTT 193
|||||||
Sbjct 1020 GTTAATCTTT 1029
>seq89015
Length=3127
Score = 96.9 bits (106), Expect = 7e-18
Identities = 76/91 (84%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 1 GGCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAG 60
||| | |||| ||||| | || ||||||| |||||| ||| |||||||||||||||||
Sbjct 3033 GGCATGGCTGGGTCAGGCTCTCGCCCATTGCCCAATATTCCCTACTGCTGCCTCCCGTAG 3092
Query 61 GAGTCTGGGCCGTGTCTCAGTCCCAATGTGG 91
|||||||| |||| ||||||| ||| |||||
Sbjct 3093 GAGTCTGGCCCGTATCTCAGTGCCAGTGTGG 3123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 996600523776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |