Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01001436.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq155057 223 4e-56 seq103 114 1e-23 >seq155057 Length=1133 Score = 223 bits (246), Expect = 4e-56 Identities = 168/198 (85%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 1 CGACCTTTTTGCTCGCCTTCAAGCGCCGGCCGGCGTTGTTGATCGCCAGCTCCGCCAGGG 60 ||||||| |||| |||||| | ||| |||||||| ||| |||| ||||| || ||||||| Sbjct 25 CGACCTTCTTGCCCGCCTTGAGGCGTCGGCCGGCATTGCTGATGGCCAGTTCGGCCAGGG 84 Query 61 CCAGGCCCAGTTCCGGATGCTCGTTGAGCCACAGGCTGAAGGCGTCCTTGACCACGCCAG 120 ||||||| |||||| | ||||||||||||||||||| ||||||||||||||||| | Sbjct 85 CCAGGCCGGTTTCCGGGTTGGCGTTGAGCCACAGGCTGAAAGCGTCCTTGACCACGCCGG 144 Query 121 AGACAAACGCCGCTGCCTCGCGGGACGACAGGCGCTCCTTGGTCTGCCCGGAGAATTGCG 180 |||| || || || ||||| ||||| |||||||||||||||||||| |||||||| || | Sbjct 145 AGACGAAGGCGGCGGCCTCACGGGAGGACAGGCGCTCCTTGGTCTGGCCGGAGAACTGGG 204 Query 181 GTTCCTGCATCTTCATCG 198 |||||||||||||||| Sbjct 205 CGTCCTGCATCTTCATCG 222 >seq103 Length=407632 Score = 114 bits (126), Expect = 1e-23 Identities = 143/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 3 ACCTTTTTGCTCGCCTTCAAGCGCCGGCCGGCGTTGTTGATCGCCAGCTCCGCCAGGGCC 62 |||| |||||| ||| | |||||| || | ||||| |||||| ||| || | Sbjct 225770 ACCTGCTTGCTCTGCTTGAGGCGCCGCTGCGCCGAGCTGATCACCAGCTGCGCGAGCTGC 225829 Query 63 AGGCCCAGTTCCGGATGCTCGTTGAGCCACAGGCTGAAGGCGTCCTTGACCACGCCAGAG 122 | | | || | ||||| ||| || | || |||||| || || |||||||| || Sbjct 225830 TCGGCGACATCGGTATGCTGGTTCAGGTAAAGCGAGAAGGCATCTTTCACCACGCCGGAC 225889 Query 123 ACAAACGCCGCTGCCTCGCGGGACGACAGGCGCTCCTTGGTCTGCCCGGAGAATTGCGGT 182 || || ||||| | |||||| |||||||| || ||||||||||| |||| ||| ||||| Sbjct 225890 ACGAAGGCCGCCGACTCGCGTGACGACAGACGTTCCTTGGTCTGGCCGGCGAACTGCGGG 225949 Query 183 TCCTGCATCTTCATCG 198 ||||||||||||| || Sbjct 225950 TCCTGCATCTTCAGCG 225965 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533466918228