Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01001603.1 Length=479 Score E Sequences producing significant alignments: (Bits) Value seq78611 280 4e-73 seq5 86.0 2e-14 >seq78611 Length=4659 Score = 280 bits (310), Expect = 4e-73 Identities = 216/255 (85%), Gaps = 1/255 (0%) Strand=Plus/Minus Query 224 GCGCCTTCACGGCCGTCGGCGCCCATGCTCGGTGAGGACCACCGCCAGAACTTTGTCGCC 283 ||||| || |||||||| |||||||||| |||| || ||||||||||| || |||||||| Sbjct 4659 GCGCCCTCGCGGCCGTCCGCGCCCATGC-CGGTCAGCACCACCGCCAGCACCTTGTCGCC 4601 Query 284 GTAGGACTTGGCGGCCGAACCGAAGGTGATGTCCACGCACGGCTTGTAGTTCAGGCGTTC 343 |||||||||||||| || |||||||||||||| || || |||||||| ||||| || || Sbjct 4600 ATAGGACTTGGCGGCGGAGCCGAAGGTGATGTCGACACAGGGCTTGTAATTCAGACGCTC 4541 Query 344 ATCCCCCGGCAGGATTTTGATCGCGCCACGGCCATCCACCATCATCTGCTTGCCACCCGG 403 || ||||| |||||||| | | |||| || ||| ||||||||||||||||| ||||| Sbjct 4540 TTCACCCGGGAGGATTTTCACCACGCCGCGCGAATCGACCATCATCTGCTTGCCGCCCGG 4481 Query 404 GGCCAGCAGCGCCAGGCCAGGGCGCAGGATGTCGCCATCCTCGGCTTCCTTGACGCTGAT 463 |||||||||||||| || |||||||| | |||||||||||||||||||||||| ||| Sbjct 4480 CGCCAGCAGCGCCAGCCCGGGGCGCAGCACGTCGCCATCCTCGGCTTCCTTGACCTGGAT 4421 Query 464 GCGGCACAGATTGTC 478 |||||||| ||||| Sbjct 4420 CCGGCACAGCTTGTC 4406 >seq5 Length=869209 Score = 86.0 bits (94), Expect = 2e-14 Identities = 97/129 (75%), Gaps = 1/129 (1%) Strand=Plus/Minus Query 152 GGCATGCCATAGATCACGCAGCTGGCTTCGTCCTGGGCCCAGATCACACTGCCGCCCTGC 211 ||||| ||||| | ||||||||||||||||| || ||||| || | ||| |||| Sbjct 177025 GGCATACCATATACGACGCAGCTGGCTTCGTCTTGCGCCCAAATTGCTGAGCCTTGCTGC 176966 Query 212 TTGAGCAGGCGCGCGCCTTCACGGCCGTCGGCGCCCATGCTCGGTGAGGACCACCGCCAG 271 || | | ||||||||||| || ||||| |||||||| | |||| | || || ||||| Sbjct 176965 TTTAATAACCGCGCGCCTTCCCGACCGTCAGCGCCCAT-CCCGGTCAATACGACTGCCAG 176907 Query 272 AACTTTGTC 280 || ||||| Sbjct 176906 TACCTTGTC 176898 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1427821904256