Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq180232 179 4e-43 seq180235 147 3e-33 seq79288 147 3e-33 seq180226 87.8 2e-15 >seq180232 Length=366 Score = 179 bits (198), Expect = 4e-43 Identities = 157/193 (81%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| ||||||||||||| ||||||||||||||||| ||||| Sbjct 120 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTTTATTATTCCATGCTAATATATTC 179 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCCTCCGC 124 |||| | ||||||||||| |||||||||||| |||| ||||||||| ||||||| | Sbjct 180 GGGCAAATGCCTGCTTTGAGCACTCTAATTTTTTCAAAGTAAAAGTCTTGGTTCCCTGAC 239 Query 125 ACA-CCAATGAAG-GCATACGGGCTCACCAAGAGGTAGGGCTGGGTAATGCAGTACTCGC 182 ||| ||| | ||| |||| | | ||||||||| | | | | || | |||||| ||| Sbjct 240 ACACCCAGTAAAGAGCATGCCAGTTCACCAAGAAGGAAGACCCGGCCAGACAGTACACGC 299 Query 183 CGTGAGGCGGACC 195 ||||| ||||||| Sbjct 300 CGTGAAGCGGACC 312 >seq180235 Length=224 Score = 147 bits (162), Expect = 3e-33 Identities = 95/103 (92%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCA-CGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||| Sbjct 122 CTAGAAACCAACAAAATAGGACCGCAACGTCCTATTCTATTATTCCATGCTAATATATTC 181 Query 65 GGGCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||| || |||||||||||||||||||||||| |||| ||||| Sbjct 182 GGGCATAGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 224 >seq79288 Length=336 Score = 147 bits (162), Expect = 3e-33 Identities = 104/117 (89%), Gaps = 3/117 (3%) Strand=Plus/Minus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||| Sbjct 215 CTAGAAACCAACAAAATAGGTCCGCACGTCCTATTTCATTATTCCATGCTAATGTATTCC 156 Query 66 GGCGT--AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCC 119 ||| | ||||||||||||||||||||||||| ||||||||| || || ||||||| Sbjct 155 GGCATCATAGCCTGCTTTGAACACTCTAATTTTTTCAAGGTAACAGTTCATGGTTCC 99 >seq180226 Length=541 Score = 87.8 bits (96), Expect = 2e-15 Identities = 82/101 (81%), Gaps = 5/101 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC--GGG 67 ||||||||||||||| || | ||||||| |||||||||||||||| |||||| | Sbjct 243 AAACCAACAAAATAG--ACCAAGGTCCTATCTTATTATTCCATGCTAACGTATTCATTGA 186 Query 68 CGTAA-GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 | ||| | ||||||||||||||||| ||| |||| ||||| Sbjct 185 CATAATGTCTGCTTTGAACACTCTATTTTACTCACAGTAAA 145 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 594160759224