Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01001645.1 Length=355 Score E Sequences producing significant alignments: (Bits) Value seq42510 141 2e-31 seq4 102 2e-19 seq7 86.0 1e-14 >seq42510 Length=9960 Score = 141 bits (156), Expect = 2e-31 Identities = 143/181 (79%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 1 TCGACGAACTGGCGCCGCAGCATG-TGAAAGTGCCGTCGGGCTCGTCGGTGCGCC-TGGA 58 ||||||| ||||| |||| || | ||| |||||||| || ||| || |||| | || Sbjct 9781 TCGACGAGCTGGCCCCGC-GCGCGCTGAGCGTGCCGTCCGGTTCG-CGCATCGCCATCGA 9838 Query 59 CTACAGCGAACAGCCGCCGATCCTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGA 118 |||| ||| | |||||| | || ||||||||||||||||| ||||||||||||||| Sbjct 9839 TTACACGGAAAACCCGCCGGTACTCGCGGTGCGCCTGCAGGAGCTGTTCGGCCTGGCGGC 9898 Query 119 CACACCGCGCATTGCCGGCGGGCGCCAGGTGGTCAAGTTGCACCTGCTGTCCCCGTCGCG 178 ||| |||||||| || ||||| || | || ||||||||||||||||||| ||| |||| Sbjct 9899 CACGCCGCGCATCGCGGGCGGTCGGCTGGGCCTCAAGTTGCACCTGCTGTCGCCGGCGCG 9958 Query 179 C 179 | Sbjct 9959 C 9959 >seq4 Length=924746 Score = 102 bits (112), Expect = 2e-19 Identities = 157/219 (72%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 74 GCCGATCCTGGCGGTGCGCCTGCAGGAATTGTTCGGCCTGGCGGAC-ACACC-GCGCATT 131 |||| | ||||||||| |||||||| |||||||||| ||| || ||||| |||| | Sbjct 787111 GCCGGTGCTGGCGGTGAAGCTGCAGGAGCTGTTCGGCCT-GCGCACGACACCGGCGC-TG 787168 Query 132 GCCGGCGGGCGCCAGGTGGTCAAGTTGCACCTGCTGTCCCCGTCGCGCAGGCCGGTGCAG 191 |||||||| ||| | | | | ||||||||||||| ||| |||| | |||||| | Sbjct 787169 GCCGGCGGCCGCGTGCCGCTGACCCTGCACCTGCTGTCGCCGGCGCGGCGCCCGGTGGCG 787228 Query 192 GTGACCCAGGATCTGGCGAACTTCTGGCGCAGTACCTACGCCGAGGTGAAGAAGGATCTG 251 || ||| || || || | |||||||||| |||| | |||||| ||||| ||| Sbjct 787229 GTCACCGGCGACCTCGCCAGCTTCTGGCGCCAGGGCTACCCGGAGGTGCGCAAGGACCTG 787288 Query 252 AAGGGGCGGTATCCGAAGCATTATTGGCCGGATGATCCG 290 || || || || ||||| |||||||| || ||| Sbjct 787289 CGCGGCCGCTACCCCAAGCACCCGTGGCCGGAAGACCCG 787327 >seq7 Length=747525 Score = 86.0 bits (94), Expect = 1e-14 Identities = 99/130 (76%), Gaps = 4/130 (3%) Strand=Plus/Minus Query 163 TGCTGTCCCCGTCGCGCAGGCCGGTGCAGGTGACCCAGGATCTGGCGAACTTCTGGCG-C 221 ||||||| ||| ||| |||| |||| | |||| ||||||||||| |||||||| | Sbjct 687093 TGCTGTCACCGGGGCGGCAGCCGCTGCAAATTACCCGGGATCTGGCGAGTTTCTGGCGGC 687034 Query 222 AGTACCTACGCC-GAGGTGAAGAAGGATCTGAAGGGGCGGTATCCGAAGCATTATTGGCC 280 | | || ||| ||||| || || || |||| ||||| || || || ||||||||||| Sbjct 687033 A--AGCTTGGCCTGAGGTAAAAAAAGAAATGAAAGGGCGTTACCCTAAACATTATTGGCC 686976 Query 281 GGATGATCCG 290 ||| |||||| Sbjct 686975 GGACGATCCG 686966 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1031737080704