Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq126730 251 1e-64 seq363 181 2e-43 seq32421 87.8 3e-15 seq7 75.2 2e-11 >seq126730 Length=1386 Score = 251 bits (278), Expect = 1e-64 Identities = 231/289 (80%), Gaps = 6/289 (2%) Strand=Plus/Minus Query 4 GCTGGATCACATGCTGGAAATCGCCGTTGAAGACGAAGAGATTGTCCAGCGTATTGCTGG 63 |||||| ||| || ||||||||||||| || ||||| || || ||| ||||| | | || Sbjct 1015 GCTGGACCACGTGGTGGAAATCGCCGTGGACGACGAGGAAATCGTCAAGCGTCTGTCCGG 956 Query 64 CCGTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAAGGT 123 ||||||||||| || || |||||||| |||||||||| ||||| ||||| || | Sbjct 955 TCGTCGCGTACACCCGGCTTCCGGCCGCGTCTACCACACCGAATACAACCCGCCGAAAGA 896 Query 124 TGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAAGGACGACACCGAAGA 183 || ||||||||||| | ||||| || || ||||| |||||| | ||||||| ||||| Sbjct 895 GGCCGGCAAGGACGACCTCACCGGTGAGGAGCTGGTGCAGCGCGAAGACGACAAGGAAGA 836 Query 184 AACCGTTCGTCACCGCCTGTCTGTTTACCATTCGCAAACCAAGCCGCTGGTGGACTTCTA 243 ||||| ||||| |||||||| || ||||||||||| ||||||||||||||||||||||| Sbjct 835 GACCGTACGTCATCGCCTGTCCGTCTACCATTCGCAGACCAAGCCGCTGGTGGACTTCTA 776 Query 244 CCAGAAGCTGGCTGCTGCCCAG---GGCAAGCCCAAGTACAGCCACGTT 289 |||||| || || ||||| || |||| ||| ||||||| |||| || Sbjct 775 CCAGAACCT--CT-CTGCCGAGACCGGCACGCCGAAGTACACCCACATT 730 >seq363 Length=289854 Score = 181 bits (200), Expect = 2e-43 Identities = 222/301 (74%), Gaps = 4/301 (1%) Strand=Plus/Minus Query 8 GATCACATGCTGGAAATCGCCGTTGAAGACGAAGAGAT--TGTCCAGCGTATTGCTGGCC 65 || ||| || |||||||| ||| | ||||| || || | ||| || | | | |||| Sbjct 172822 GACCACGTGGTGGAAATCCGCGTCGCCGACGAGGAAATCATCTCCCGCCTGT--CCGGCC 172765 Query 66 GTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAAGGTTG 125 | ||||| || | ||||| ||||| |||||| || |||| ||||| |||| | Sbjct 172764 GCCGCGTGCACCCGGGTTCGGGTCGCGTCTACCACGTCGAGCACAACCCGCCGAAGGCGG 172705 Query 126 CAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAAGGACGACACCGAAGAAA 185 |||||||||||||| ||||||||||| ||||| |||||| ||||||||||||||||| Sbjct 172704 AGGGCAAGGACGATGTCACCGGCGAAGAGCTGGTGCAGCGCCCGGACGACACCGAAGAAA 172645 Query 186 CCGTTCGTCACCGCCTGTCTGTTTACCATTCGCAAACCAAGCCGCTGGTGGACTTCTACC 245 |||| || | ||||| ||| ||||| || ||| |||||||||| | |||||||| Sbjct 172644 CCGTGCGCAAGCGCCTCGATGTCTACCACAGCCAGACCCAGCCGCTGGTCGGCTTCTACC 172585 Query 246 AGAAGCTGGCTGCTGCCCAGGGCAAGCCCAAGTACAGCCACGTTGAAGGCGTTGGCTCGG 305 || ||| || | | | |||| | |||||||||| || |||||||| ||||||| Sbjct 172584 AGGAGCGCGCCGGTCAGCCGGGCGCCGCGAAGTACAGCCTGGTCGAAGGCGTGGGCTCGG 172525 Query 306 T 306 | Sbjct 172524 T 172524 >seq32421 Length=14609 Score = 87.8 bits (96), Expect = 3e-15 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 8 GATCACATGCTGGAAATCGCCGTTGAAGACGAAGAGATTGTCCAGCGTATTGCTGGCCGT 67 |||||| || | ||||| | ||| || ||||||||||| || ||| | |||| ||| Sbjct 14336 GATCACGTGATTGAAATTGATGTTCCTGATGAAGAGATTGTTCAACGTTTGTCTGGTCGT 14277 Query 68 CGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAAGGTTGCA 127 || ||| ||| || || ||||| || |||| ||| || ||||| ||||| || | | Sbjct 14276 CGTCAACATCCAGCATCTGGTCGCGTATATCACATCGTTTATAATCCACCAAAAGTGGAA 14217 Query 128 GGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCG 165 || || || || | ||| || ||||| || ||||| || Sbjct 14216 GGTAAAGATGACGAGACTGGTGAAGAGCTTGTACAACG 14179 >seq7 Length=747525 Score = 75.2 bits (82), Expect = 2e-11 Identities = 86/116 (74%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 44 ATTGTCCAGCGTATTGCTGGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACC 103 || ||| |||| || |||||||| ||||| || || || || || |||||| Sbjct 471700 ATCGTCGAGCGGATGAGCGGCCGTCGGGTACATCCGGCGTCAGGTCGGGTCTACCACTTG 471641 Query 104 GTCTACAATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGT 159 || || ||||| ||||||||||| || || || |||| |||||||||||| |||| Sbjct 471640 GTATATAATCCACCAAAGGTTGCCGGTAAAGATGATGAAACCGGCGAAGACTTGGT 471585 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897579317888