Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01001688.1 Length=394 Score E Sequences producing significant alignments: (Bits) Value seq4 250 6e-64 seq91011 226 7e-57 seq1 143 6e-32 seq85526 98.7 2e-18 seq7 91.5 3e-16 seq102887 78.8 2e-12 >seq4 Length=924746 Score = 250 bits (276), Expect = 6e-64 Identities = 300/403 (74%), Gaps = 15/403 (4%) Strand=Plus/Plus Query 1 CGATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTT 60 ||||||| |||| ||||||||||||| |||||| |||||||| |||||||| || || | Sbjct 709393 CGATGGTGAGCAGCTCGCCGCCCACCGAGGTCCAGGCCAGGCCGGTGACCTGGCCCACCT 709452 Query 61 GATCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAG-- 118 |||||| | ||||||| ||||||| |||| ||||||||||||||| ||| ||| || Sbjct 709453 GATCCTCCGCCTCGGCCTTGCCGTAGTTGAACTTGCGCACGCCGAGGTAGTCCTCGAGAC 709512 Query 119 -GGAGTCGGCCGTGACCTTCACCGAGAAGCGTTTTTCCAGCGCATGT-----TCCTTGAC 172 || ||| | |||| ||| || | || | | || |||| ||||| || Sbjct 709513 GGGCCTCGTC---GACCGTCAGCGGGCCGC--TGCGCGTGCCCATGACCGCCTCCTTCAC 709567 Query 173 CGCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGT 232 |||||||||||||||||| ||||||| ||| || || ||||| ||||| |||||||| Sbjct 709568 CGCCTTGCGGCAGATCTTGGCGATCTCGCGGTCAAGCGAGCGCACGCCGGCCTCGCGGGT 709627 Query 233 GTAGTAGCGGACGATGTCGCGGATCGTGCCGAC-TTCAAATTCGATCTCGCCCTTCTTCA 291 ||||||||| |||||||||||| | ||| | ||| | | |||| || ||||| Sbjct 709628 GTAGTAGCGCACGATGTCGCGGCAGGCGCCTTCGCTCAGCGAC-AGCTCGTCCGGCTTCA 709686 Query 292 GGCCATTGGCCGAAATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGT 351 |||| |||| | |||||| || ||||||| | ||||||| || ||| |||| Sbjct 709687 GGCCGGCGGCCTCCAGCTGCTTCGGAATCAGGTACTGGCGGGCGATGCCGACCTTTTCGT 709746 Query 352 CTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 | |||||||| || |||||||| || | ||||| |||||||| Sbjct 709747 CCTCGGTGTAGCCGGGCAGGCGGATGATCTCCATGCGGTCCAG 709789 >seq91011 Length=3054 Score = 226 bits (250), Expect = 7e-57 Identities = 191/233 (82%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 130 TGACCTTCACCGAGAAGCGTTTTTCCAGCGCATGTTCCTTGACCGCCTTGCGGCAGATCT 189 ||||| |||| || ||| || ||| ||| || ||||||||| |||||||||||| || Sbjct 3049 TGACCAGCACCTTGATGCGCTTATCCTTCGCGTGCTCCTTGACCACCTTGCGGCAGACCT 2990 Query 190 TCGCGATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAGTAGCGGACGATGT 249 | | |||||| || ||||| | |||||| ||||| ||||||||||||||||||| ||||| Sbjct 2989 TGGAGATCTGTCGTTCCAGACTACGCACCCCGGCCTCGCGGGTGTAGTAGCGGATGATGT 2930 Query 250 CGCGGATCGTGCCGACT--TCAAATTCGATCTCGCCCTTCTTCAGGCCATTGGCCGAAAT 307 |||| || | | |||| ||||| || | ||||||||| ||||||||||||||| | Sbjct 2929 CGCGAATGG--CAGACTCATCAAACTCCAGCTCGCCCTTTTTCAGGCCATTGGCCAGCAC 2872 Query 308 CTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCTTCGGTGT 360 ||||||||||| ||||| ||||||||||| |||| ||||||||||||||||| Sbjct 2871 CTGCTTGGGCGTCAGGTATTTGATGGCGATATTGACCTTCTCGTCTTCGGTGT 2819 Score = 111 bits (122), Expect = 4e-22 Identities = 90/109 (83%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 3 ATGGTCAGCAACTCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTTGA 62 ||||||||||||||||| || ||||||||||| ||||| || || |||||||||| ||| Sbjct 109 ATGGTCAGCAACTCGCCACCGACCTGGGTCCAGGCCAGCCCGGTCACCTGACCGATCTGA 50 Query 63 TCCTGCTGCTCGGCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGT 111 ||||||||||||||||| ||| ||| | | |||||||| | | ||| Sbjct 49 TCCTGCTGCTCGGCCAGTCCGAAGCGGTAACGACGCACGCCCAAGTAGT 1 >seq1 Length=1655743 Score = 143 bits (158), Expect = 6e-32 Identities = 262/381 (69%), Gaps = 2/381 (1%) Strand=Plus/Plus Query 15 TCGCCGCCCACCTGGGTCCACGCCAGGCCAGTGACCTGACCGACTTGATCCTGCTGCTCG 74 ||||||||||| |||||| ||||| || || ||| |||||| ||||| | || |||| Sbjct 254845 TCGCCGCCCACGCTGGTCCATGCCAGACCCGTCACCACACCGACCTGATCTTCCTTCTCG 254904 Query 75 GCCAGGCCGTAGCTGAATTTGCGCACGCCGAGGAAGTGCTCCAGGGAGTCGGCCGTGACC 134 ||||| || |||| ||| ||||||| || | | ||| |||| ||| ||| Sbjct 254905 GCCAGACCATAGCGGAAGCGTTGCACGCCCAGATATTCGCCCACCTTCTCGGGCGTCACC 254964 Query 135 TTCACCGAGAA-GCGTTTTTCCAGCGCATGTTCCTTGACCGCCTTGCGGCAGATCTTCGC 193 | || | || || ||| | | |||| | | |||||||||||| | ||||| Sbjct 254965 TCGACGGCTTTCGCCTTCTTCTTGAGGATGT-CGGTCACCGCCTTGCGGGCAAGTTTCGC 255023 Query 194 GATCTGGCGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAGTAGCGGACGATGTCGCG 253 ||||| |||||| ||| ||||| ||||| ||||||||||| ||||||| | |||| Sbjct 255024 GATCTCGCGCTCAAGGTTCCGCACCCCGGCCTCGCGGGTGTAATAGCGGATCACGTCGTT 255083 Query 254 GATCGTGCCGACTTCAAATTCGATCTCGCCCTTCTTCAGGCCATTGGCCGAAATCTGCTT 313 | || | || | | || ||||||||||||||| || || || | |||||| Sbjct 255084 CAGCGCGTCGTCGGTGATGCTGAACTCGCCCTTCTTCAGACCGTTCGCTTCCACCTGCTT 255143 Query 314 GGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCTTCGGTGTAACCCGGCAGGCG 373 |||| || | || | ||||| | | ||| || || ||||| || || | ||| Sbjct 255144 GGGCAGCAGATGCTGGCGCGCGATCTCGCGCTTTTCATCCTCGGTATAGCCGGCCAGAGA 255203 Query 374 AATCACTTCCATCCGGTCCAG 394 ||| | |||||||||||||| Sbjct 255204 AATGATCTCCATCCGGTCCAG 255224 >seq85526 Length=205 Score = 98.7 bits (108), Expect = 2e-18 Identities = 75/89 (84%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 306 ATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTGATCTTCTCGTCTTCGGTGTAACCC 365 |||||||| |||| ||||| | |||||||||||| ||||||||| |||||||| ||| Sbjct 4 ATCTGCTTCGGCGACAGGTAGCGGGTGGCGATGTTGAGCTTCTCGTCCTCGGTGTAGCCC 63 Query 366 GGCAGGCGAATCACTTCCATCCGGTCCAG 394 || | ||| ||||||||||| |||||||| Sbjct 64 GGGATGCGGATCACTTCCATGCGGTCCAG 92 >seq7 Length=747525 Score = 91.5 bits (100), Expect = 3e-16 Identities = 161/233 (69%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 164 TTCCTTGACCGCCTTGCGGCAGATCTTCGCGATCTGGCGCTCCAGGCCACGCACACCGGC 223 || ||| || ||||||||||| | |||| || | ||||| | || ||||| ||||| Sbjct 430878 TTGCTTCACTGCCTTGCGGCAAAGTTTCGAAATTTCCCGCTCTAAGCTGCGCACCCCGGC 430937 Query 224 TTCGCGGGTGTAGTAGCGGACGATGTCGCGGATCGTGCCGACTTCAAATTCGATCTCGCC 283 ||| ||||||||||| || | ||| || || | || |||||| | ||| Sbjct 430938 TTCACGGGTGTAGTAACGAATAATGCCGATAATGGCGCTATCTTCAATCAGCACTTCGGA 430997 Query 284 CTTCTTCAGGCCATTGGCCGA--AATCTGCTTGGGCGCGAGGTACTTGATGGCGATGTTG 341 | ||||| |||||| ||| | ||| || || | |||| || |||| || || Sbjct 430998 CGGCTTCAAACCATTG--CGACTCACCTGTTTTGGTACCAGGTGCTGTTTGGCAATATTC 431055 Query 342 ATCTTCTCGTCTTCGGTGTAACCCGGCAGGCGAATCACTTCCATCCGGTCCAG 394 | ||| || || ||||| ||||||| | ||| || ||||||||||| ||||| Sbjct 431056 AGCTTTTCATCCTCGGTATAACCCGATAAGCGGATGACTTCCATCCGATCCAG 431108 >seq102887 Length=1993 Score = 78.8 bits (86), Expect = 2e-12 Identities = 132/191 (69%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 201 CGCTCCAGGCCACGCACACCGGCTTCGCGGGTGTAGTAGCGGACGATGTCGCGGATCGTG 260 ||||| | | ||| || || ||||| || ||||||||||||| ||| | || | | Sbjct 743 CGCTCTAAGTTACGAACGCCCGCTTCACGTGTGTAGTAGCGGATAATGCCAATAATTGCG 684 Query 261 CCGACTTCAAATTCGATCTCGCCCTTCTTCAGGCCATTGGCCGAAATCTGCTTGGGCGCG 320 | | | ||| ||| | || || || | |||||| | || || || || Sbjct 683 CTGTCAGCAATTTCAACTTCATGCTCTTTTAAACCATTGCGCTTAACTTGTTTTGGAATC 624 Query 321 AGGTACTTGATGGCGATGTTGATCTTCTCGTCTTCGGTGTAACCCGGCAGGCGAATCACT 380 | || || | || ||||| | ||||||||||||||||||||||| |||||||| ||| Sbjct 623 AAGTGCTGTTTAGCAATGTTTAGCTTCTCGTCTTCGGTGTAACCCGAAAGGCGAATAACT 564 Query 381 TCCATCCGGTC 391 ||||| ||||| Sbjct 563 TCCATACGGTC 553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1156312146176