Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq549 273 6e-71 seq7259 232 2e-58 seq100661 183 8e-44 seq79392 122 2e-25 seq749 120 8e-25 seq1 77.0 9e-12 >seq549 Length=260093 Score = 273 bits (302), Expect = 6e-71 Identities = 313/419 (75%), Gaps = 4/419 (1%) Strand=Plus/Plus Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60 |||||||| ||||||||||| |||||||| | |||| || ||||||||||| |||| Sbjct 189086 CGATCAGGCGAACTTCACGGGCGCCGGCGCCGATCACCGACTCGCGGATGGCACGGCGCT 189145 Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 120 | ||| | || |||||||| || ||||||| |||||| || || | ||| ||| || | Sbjct 189146 CGACCAGCGTCGACTTGCAGGGCACGCAGACCAGCACGCGCGGACGCGGCGGCATGATGC 189205 Query 121 TGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGG 180 | ||||| ||||| |||||||||||||||||||| ||||| || |||||||| Sbjct 189206 CGGACTCGTGCACCTTCTTGATGAAGTACTGCAGCATTTTCTCCGTCACCTCGAAGTCGG 189265 Query 181 CGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCA 240 |||| |||||||| || | |||||| ||||| | || ||||| || |||||||| |||| Sbjct 189266 CGATGACGCCGTCCTTGAGCGGACGGATGGCGGAGATGTTGCCCGGGGTACGGCCCAGCA 189325 Query 241 TGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCATGG--GTCCGAAT 298 |||||||||| ||||| |||||||| |||| | | || | | || || || Sbjct 189326 TGCGCTTGGCATCGGTACCGACGGCGGCGACGGTCT--TGGTCGCGCCGGACTGGCGGAT 189383 Query 299 GGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTGTT 358 ||| || ||||| ||||| | || ||||| ||||| | | ||||| | || ||||| Sbjct 189384 GGCGACCACCGACGGCTCGTCGAGCACGATGCCGCGGCCCGGTACGTAGACGAGAGTGTT 189443 Query 359 GGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAACA 417 ||| ||||| || || |||| ||| ||| |||| |||| ||| | ||| ||||||| Sbjct 189444 GGCGGTGCCGAGATCGATGGCAAGGTCGGTGGAGAACAGGCCGAGGAGTCGTTTGAACA 189502 >seq7259 Length=78460 Score = 232 bits (256), Expect = 2e-58 Identities = 309/428 (72%), Gaps = 6/428 (1%) Strand=Plus/Minus Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62 ||||| |||||||||| ||||| || || |||| || ||||| ||||| || || || Sbjct 2303 ATCAGATACACTTCACGCGCACCAGCCCCCTGGGCTGACTCACGAATGGCCCGGCGTTCA 2244 Query 63 ACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACTG 122 ||||| || ||| || ||||| |||| || ||| | ||||| || |||| |||||| Sbjct 2243 ACCTGAGTTGACCCACAAGGAACACAGACCAACACTCTCGGGCTTGGGCGCAGAAAACTG 2184 Query 123 TTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGCG 182 || ||| ||| ||| |||| ||| | ||| |||||| || |||||| || Sbjct 2183 TTGCTGTGCGCCTGACGGATAAAGTGCTGTAACATTTTCTCGGTAACATAGAAGTCAGCA 2124 Query 183 ATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATG 242 || || ||||||||||| || || || || |||||| || ||||| | || ||||| Sbjct 2123 ATAACACCGTCTTTCATTGGCCGGATTGCTTTAATATTACCAGGTGTTCTACCCAGCATC 2064 Query 243 CGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCA--TGGGTC----CGA 296 ||||| || || || || ||| | ||||||||| | |||| | || ||| Sbjct 2063 CGCTTCGCAGCGTGACCAACAGCAGCAACACTTTTCGGGCCACCAGCACGCTCCTGACGA 2004 Query 297 ATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGGTG 356 || || || ||||| ||||| |||| ||||| || | || || ||||||||||| Sbjct 2003 ATAGCAACTACCGAAGGCTCGTTCAAAACGATGCCCTGATCTTTGACATAAATAAGGGTA 1944 Query 357 TTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGAAC 416 || || || || ||||||||||| |||||| ||||||| ||||| |||| ||| || ||| Sbjct 1943 TTAGCTGTACCAAGGTCAATGGACAGATCGTTGGAAAAAATGCCGCGCAATTTATTAAAC 1884 Query 417 ATGGGGAA 424 |||||||| Sbjct 1883 ATGGGGAA 1876 >seq100661 Length=2148 Score = 183 bits (202), Expect = 8e-44 Identities = 298/428 (70%), Gaps = 6/428 (1%) Strand=Plus/Minus Query 1 CGATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCT 60 |||| || | |||||||| |||||||| || | ||||| ||||| || ||||| | Sbjct 493 CGATTAGATAAACTTCACGAGCACCGGCACCCATAGCCGACTCACGAATCGCACGTTTTT 434 Query 61 CCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAAC 120 | || || || | || || || ||||| || ||||| ||||| || ||| || Sbjct 433 CTACTTGTGTTGCACCACAAGGCACACAGATAAGAACACGCGGGCTTGGGCGCATAAAGT 374 Query 121 TGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGG 180 |||| | || || | ||||| |||| || ||||| || ||| ||| |||||| | Sbjct 373 TGTTGTTATGCACTTGCTTGATAAAGTGTTGTAGCATTTTTTCGGTCACGTAGAAGTCAG 314 Query 181 CGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCA 240 | || || ||||||||||| |||||||| || || || || |||||||| || |||| Sbjct 313 CAATGACACCGTCTTTCATTGGACGAATCGCTTTGATGTTACCCGGTGTACGACCTAGCA 254 Query 241 TGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCA--TGGGTC----C 294 | |||| || ||||| ||||| | | || || || | |||| | || | Sbjct 253 TTTGCTTAGCTTCGGTACCGACAGATGCTACGCTCTTAGGGCCACCAGCACGCTCTTGAC 194 Query 295 GAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAATAAGGG 354 |||| || ||||| || ||||| || | || ||||| || |||||||| |||| Sbjct 193 GAATAGCAACAACTGAAGGCTCGTTTAATACAATACCTTCTTCTTTTACGTAAATTAGGG 134 Query 355 TGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACATGCCACGCAGTTTCTTGA 414 | ||||| || |||| ||| || || |||||| | ||||| || ||||| ||||| || | Sbjct 133 TATTGGCTGTACCCAAGTCGATCGATAGATCGTTTGAAAAAATACCACGGAGTTTTTTAA 74 Query 415 ACATGGGG 422 ||||| || Sbjct 73 ACATGAGG 66 >seq79392 Length=4523 Score = 122 bits (134), Expect = 2e-25 Identities = 248/364 (68%), Gaps = 6/364 (2%) Strand=Plus/Plus Query 41 TTCACGGATGGCACGACGCTCCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACG 100 |||||| || ||||||||||| ||| || || || || || || || | | ||||| Sbjct 4139 TTCACGAATAGCACGACGCTCAACCAAAGTTGATTTACATGGTACACAAACTACAACACG 4198 Query 101 AGG-GCTGGGCTGCAGGAAACTGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCT 159 || ||| || | | |||| ||||| || || ||| |||||| | | || ||| Sbjct 4199 CGGCGCT-GGTGGGAACAAACGCTTTTCATGTACTTTGCCGATGAACTGATTCAACATGG 4257 Query 160 TCTCGCAGACGCTGAAGTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATAT 219 | || || ||| || || ||||| |||||||||||||||||||| |||| |||| Sbjct 4258 TTTCAGTTACTTCGAAATCAGCAATCACACCGTCTTTCATCGGACGAATTGCAGAGATAT 4317 Query 220 TGCCTGGTGTACGGCCGAGCATGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCT 279 | |||||||||| || | ||| | || || || || || ||| | ||| |||| | Sbjct 4318 TCGCTGGTGTACGACCTAACATTTGTTTAGCATCAAGACCTACAGCAGCAACAATTTTTT 4377 Query 280 GATTACCATGGGTCCGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCG--CTC 337 | |||| ||||| |||||||| | || ||||| | | || || || || Sbjct 4378 GCGAACCACTATGACGAATCGCCACAACAGTAGGTTCATTTAATATAATGCCACGGCCTG 4437 Query 338 GCGCACGTAAATAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAACAT 397 | ||| |||||||| || || ||||| || | ||||||| | ||| ||||||| Sbjct 4438 GTGCA--TAAATAAGCGTATTTGCAGTACCTAAATCAATGGCTAAATCCGGCGAAAACAG 4495 Query 398 GCCA 401 |||| Sbjct 4496 GCCA 4499 >seq749 Length=235233 Score = 120 bits (132), Expect = 8e-25 Identities = 248/366 (68%), Gaps = 10/366 (3%) Strand=Plus/Minus Query 41 TTCACGGATGGCACGACGCTCCACCTGGGTGGACTTGCACGGAACGCAGATCAGCACACG 100 ||||||||| ||||||||||| ||| || || ||||| || || || | || ||||| Sbjct 206504 TTCACGGATTGCACGACGCTCAACCAAAGTTGATTTGCATGGCACACACACCACAACACG 206445 Query 101 AGGGCTGGGCTGCAGGAAACTGTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTT 160 || || | | |||| ||||| || || ||| |||||| | | || ||| | Sbjct 206444 TGGCGCAGGTGGGAACAAACGCTTTTCATGTACTTTGCCGATGAACTGATTCAACATGGT 206385 Query 161 CTCGCAGACGCTGAAGTCGGCGATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATT 220 || || ||| || || || || ||||||||||| |||||||| || | ||||| Sbjct 206384 TTCAGTTACTTCGAAATCAGCAATTACACCGTCTTTCATAGGACGAATTGCTGATATATT 206325 Query 221 GCCTGGTGTACGGCCGAGCATGCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTG 280 |||||||||| || | ||| | || || || || || ||| | ||| |||| || Sbjct 206324 CGCTGGTGTACGACCTAACATTTGTTTAGCATCAAGACCTACAGCAGCAACAATTTTTTG 206265 Query 281 ATTACC---ATGGGTCCGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCG--C 335 ||| |||| ||||| ||||| || | ||| ||||| | | || || || | Sbjct 206264 CGAACCGCTATGG---CGAATTGCCACCACAGTTGGTTCATTTAATATAATGCCACGGCC 206208 Query 336 TCGCGCACGTAAATAAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAAC 395 | | ||| |||||||| || || ||||| || | ||||||| | ||| |||||| Sbjct 206207 TGGTGCA--TAAATAAGTGTATTTGCAGTACCTAAATCAATGGCTAAATCCGGCGAAAAC 206150 Query 396 ATGCCA 401 | |||| Sbjct 206149 AGGCCA 206144 >seq1 Length=1655743 Score = 77.0 bits (84), Expect = 9e-12 Identities = 103/140 (74%), Gaps = 4/140 (3%) Strand=Plus/Minus Query 128 GTGAACCTTGTTGATGAAGTACTGCAGCATCTTCT--CGCAGACGCTGAAGTCGGCGATC 185 ||| |||||| |||||| | || | ||| |||| ||| | | ||| ||||||||| Sbjct 724768 GTGCACCTTGCGGATGAAATGCTTGATCAT-TTCTTCCGC-GCTGTCGAAATCGGCGATC 724711 Query 186 ACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCATGCGC 245 |||||||| |||||| || ||||| | || |||| || || ||||||||||| || Sbjct 724710 ACGCCGTCGCGCATCGGGCGGATGGCCTCGATGCTGCCGGGGGTGCGGCCGAGCATCAGC 724651 Query 246 TTGGCCTCGGTGCCGACGGC 265 ||||| || ||| ||||| Sbjct 724650 TTGGCATCCTCGCCCACGGC 724631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1351160325504