Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01001693.1 Length=610 Score E Sequences producing significant alignments: (Bits) Value seq4461 333 1e-88 seq737 242 1e-61 >seq4461 Length=107335 Score = 333 bits (368), Expect = 1e-88 Identities = 382/513 (74%), Gaps = 7/513 (1%) Strand=Plus/Plus Query 14 CCCACCCCGGTGTGGTGCGGCGACCTCCCCTACATCTGGGCCCATGGGAAATGGCATTAC 73 |||| | ||| |||||||||||| || ||||| ||||||| | || ||||||||| Sbjct 32483 CCCAATCAGGTCTGGTGCGGCGACATCACCTACGTCTGGGCAGAGGGCCGCTGGCATTAC 32542 Query 74 CTGGCTGTCGCGCTGGATCTTTGCTCGCGCCGGGTGGTGGCTTGGGCGTT---GACCAGA 130 ||||| | | ||||||||| | | |||| ||||| |||| |||||||| |||||| Sbjct 32543 CTGGCGGCGGTGCTGGATCTGTTCACGCGACGGGTCGTGGGCTGGGCGTTCTCGACCAGG 32602 Query 131 CACCCCGGACGCCGATCTGGCTATGCGGGCGCTGGATATGGCTTACCAGCCTGCACGACG 190 | | ||||| ||||||| ||| ||||||||| ||||| || ||| | || Sbjct 32603 C----CAGACGCTGATCTGGTGGTGCAGGCGCTGGACATGGCCTATGAGCAACGCGGTCG 32658 Query 191 ACCTCATGGTCTGCTGGTTCACTCGGATCAAGGGTCGCAGTATGCGAGTCGTTTATTTCG 250 || || || ||| || | ||||| ||||| || ||||||||||| || || || Sbjct 32659 TCCGCAGGGCCTGATGTTCCACTCTGATCAGGGCGGTCAGTATGCGAGCCGGAAGTTCCG 32718 Query 251 CCAGCGGCTGTGGCGTTATCGCATGCGCCAGAGCATGAGTCGCCGGGGAAATTGCTGGGA 310 ||||| |||||||| || || || || ||||||||||| || || || |||||||| Sbjct 32719 GCAGCGCCTGTGGCGCTACCGGATCGAGCAAAGCATGAGTCGTCGTGGCAACTGCTGGGA 32778 Query 311 CAATGCGCCAATGGAGCGCGTGTTCCGCAGCTTGAAAACGGAGTGGATACCGACCACGGG 370 ||| |||| |||||||| ||||||||||| ||||| |||| ||| | |||| | ||| Sbjct 32779 CAACTCGCCGATGGAGCGGCTGTTCCGCAGCCTGAAATCGGAATGGGTGCCGAACGTGGG 32838 Query 371 TTACCGAACGGCTCAAGAAGCCCAGCGCGATATCAGCCAATTCTTAATGCATCGGTACAA 430 ||| ||||| || |||||||| || || |||||||| | | | ||||| || ||||| Sbjct 32839 CTACATGACGGCACAGGAAGCCCATCGGGACATCAGCCATTACCTGATGCACCGATACAA 32898 Query 431 CTGGATTCGCCCCCATCGATTCAACGGTGGGCTGGCGCCAGCTCGGGCCGAAGAAAAACT 490 |||||| || || |||| |||| | || |||||||| ||| || ||||||||||| Sbjct 32899 CTGGATCCGGCCGCATCAGCTCAATGACGGACTGGCGCCGGCTGTTGCGGAAGAAAAACT 32958 Query 491 TAACGTCGTGTCCGGGATTAGTTGACCACTACA 523 ||| ||||||||||| |||||||||||||| Sbjct 32959 TAAAACAGTGTCCGGGATGAGTTGACCACTACA 32991 >seq737 Length=236300 Score = 242 bits (268), Expect = 1e-61 Identities = 290/391 (74%), Gaps = 2/391 (1%) Strand=Plus/Minus Query 134 CCCGGACGCCGATCTGGCTATGCGGGCGCTGGATATGGCTTACCAGCCTGCACGACGACC 193 ||| ||||| ||||||| |||| |||||||| |||||||| ||| | || || Sbjct 90983 CCCTGACGCTGATCTGGTCATGCAGGCGCTGGGCATGGCTTATGAGCAACGCGGTCGTCC 90924 Query 194 TCATGGTCTGCTGGTTCACTCGGATCAAGGGTCGCAGTATGCGAGTCGTTTATTTCGCCA 253 ||| |||||| || | ||||||||||| || ||| ||||| | || || || | Sbjct 90923 TCAGGGTCTGATGTTCCACTCGGATCAGGGTGGGCAATATGCATGCCGGAAGTTCCGGCC 90864 Query 254 GCGGCTGTGGCGTTATCGCATGCGC-CAGAGCATGAGTCGCCGGGGAAATTGCTGGGACA 312 ||| ||||| || || || || ||| |||||||| ||||| || || || | |||||||| Sbjct 90863 GCGCCTGTGACGCTACCGGAT-CGCGCAGAGCATAAGTCGTCGCGGCAACTTCTGGGACA 90805 Query 313 ATGCGCCAATGGAGCGCGTGTTCCGCAGCTTGAAAACGGAGTGGATACCGACCACGGGTT 372 | |||| |||||||| |||||||||| ||||| |||| | | | |||| ||||| Sbjct 90804 ACTCGCCGATGGAGCGGCTGTTCCGCAGTCTGAAATCGGAATTGGTGCCGAGTGTGGGTT 90745 Query 373 ACCGAACGGCTCAAGAAGCCCAGCGCGATATCAGCCAATTCTTAATGCATCGGTACAACT 432 || ||||| || || || || || || |||||||| | | ||||| |||||||||| Sbjct 90744 ACATGACGGCCCAGGAGGCACATCGGGACATCAGCCATTAGCTTATGCACCGGTACAACT 90685 Query 433 GGATTCGCCCCCATCGATTCAACGGTGGGCTGGCGCCAGCTCGGGCCGAAGAAAAACTTA 492 |||| || || |||| ||||| | || |||||||| ||| ||| |||||||| | || Sbjct 90684 GGATACGGCCGCATCAGTTCAATGACGGACTGGCGCCGGCTATGGCGGAAGAAAAGCCTA 90625 Query 493 ACGTCGTGTCCGGGATTAGTTGACCACTACA 523 || |||||| |||| |||||||||||||| Sbjct 90624 ACTCAGTGTCCCGGATGAGTTGACCACTACA 90594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1842968126324