Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01001757.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq18623 104 6e-20 >seq18623 Length=30787 Score = 104 bits (114), Expect = 6e-20 Identities = 213/321 (66%), Gaps = 2/321 (1%) Strand=Plus/Plus Query 3 ACGTTCGGGCTCTGGAAGCCGACGTCATAGATGTGGAAGCCCAAGTGCATGA-TCTTCTG 61 ||||| ||||| ||||| || || || || || ||||| || |||||||| | | |||| Sbjct 6690 ACGTTAGGGCTTTGGAAACCAACATCGTAAATATGGAAACCTAAGTGCATAAATTTTCTA 6749 Query 62 GTCCAGGTGCAGGTAGGGGTAGTTCCCGTCCACTGGCAGCGACGGCGCCAGCTTCACNNN 121 || | || | ||| ||| |||| ||||| | ||||| | || |||| ||| || Sbjct 6750 -TCTAAATGTATGTATGGGAAGTTACCGTCAAGAGGCAGTGTTGGTGCCATCTTAACAAC 6808 Query 122 NNNNNNNNNNNNNNNNNNCGCCACTTCACCGGCAGCGCGGGCCACGGCGAGGATCATGCC 181 || ||||||||||| || || || || || ||||| | || Sbjct 6809 ACCAACAAGCATTAGTGGTGCTACTTCACCGGCTGCACGTGCAACCGCTAGGATTAAACC 6868 Query 182 GGTCGTCATGGCCGGGCTTGCCATGGGCAAGACGATCTTCCACAGCGTCTCGGCCTTGGT 241 ||| | || || ||||||||||| || | || ||| ||| ||||| || || || || Sbjct 6869 TGTCATAATCGCAGGGCTTGCCATCGGAATGATGATGCGCCATAGCGTTTCTGCTTTTGT 6928 Query 242 CGCGCCCAAGGCCAGCGAGCCCTCGCGCACGGTACGCGGAATACGCGCCAAACCTTCTTC 301 ||||| | || | || || | || || |||| || ||||| | ||||||||||| Sbjct 6929 TGCGCCAAGTGCTAATGAACCATGACGAACCGTACTTGGTATACGTGATAAACCTTCTTC 6988 Query 302 GGTGGCCACGATCACCACCGG 322 || | || || || || || Sbjct 6989 TGTCGAAACAATAACAACAGG 7009 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1239362189824