Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq5165 147 2e-33 seq44255 140 3e-31 seq89015 100 2e-19 seq4656 93.3 4e-17 seq1223 87.8 1e-15 seq48204 77.0 3e-12 >seq5165 Length=98167 Score = 147 bits (162), Expect = 2e-33 Identities = 129/161 (80%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| ||||||||| ||| ||| ||| |||||||||| ||||||| Sbjct 35345 TCGAGTTGCAGAGTACAATCCGAACTGAGATGGCTTTTAAGGGATTAGCTTAGCCTCGCG 35286 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 || || |||| |||| ||||||||| ||||||| ||||| |||||||||||| Sbjct 35285 ACTTTGCAGCCCATTGTAGCCACCATTGTAGCACGTGTGTAGCCCACTCCATAAGGGCCA 35226 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCGGTTTGTCAC 161 ||| |||||||| |||||||||||||||||| |||| |||| Sbjct 35225 TGATGACTTGACATCATCCCCACCTTCCTCCAGTTTATCAC 35185 >seq44255 Length=9396 Score = 140 bits (154), Expect = 3e-31 Identities = 131/163 (80%), Gaps = 4/163 (2%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACA-CTTTCTGGGATTAGCTCCCCCTCGC 59 |||||||||||| | ||||||| ||| || || |||| |||||||||||| | |||| Sbjct 8968 TCGAGTTGCAGAGTGCAATCCGAACT--GAGACGGCTTTTTGGGATTAGCTCGACTTCGC 9025 Query 60 GGGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCC 119 | |||| |||| ||| |||||||| ||||||| ||||| ||| |||||||| Sbjct 9026 AGTCTGGCTGCCCATTGTCACCGCCATTGTAGCACGTGTGTAGCCCAGCCCGTAAGGGCC 9085 Query 120 ATGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTGTCAC 161 ||||||||||||||||||||||||||||||| ||| || |||| Sbjct 9086 ATGAGGACTTGACGTCATCCCCACCTTCCTCTCGGCTTATCAC 9128 >seq89015 Length=3127 Score = 100 bits (110), Expect = 2e-19 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||||| | ||||| ||| || |||||| | | || || || | || Sbjct 2120 TCGAGTTGCAGACCCCGATCCGAACTGAGACGCACTTTTAGAGGTTGGCATCCTGTTGCC 2179 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || ||| ||||||| |||||||| ||||||| ||||| | ||||||||| Sbjct 2180 AGGTAGCTACCCGCTGTATGCGCCATTGTAGCACGTGTGTCGCCCTGGGCGTAAGGGCCA 2239 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC 150 ||| ||||||||||| ||||| |||||||| Sbjct 2240 TGATGACTTGACGTCGTCCCCTCCTTCCTC 2269 >seq4656 Length=104629 Score = 93.3 bits (102), Expect = 4e-17 Identities = 116/158 (73%), Gaps = 1/158 (1%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 ||||||||||||| | ||||| ||| || |||| | |||| || | | | || Sbjct 91704 TCGAGTTGCAGACCCCGATCCGAACTGTGAATGGCTTTTCGAGATTGGCATCACATTGCT 91763 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || |||| ||||| |||||||| ||||||| ||||| | ||||||||| Sbjct 91764 GTGTAGCTGCCCGCTGTACCATCCATTGTAGCACGTGTGTAGCCCCGGACGTAAGGGCCA 91823 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC-CGGTTTG 157 ||| ||||||||||| ||||| |||||||| | ||||| Sbjct 91824 TGATGACTTGACGTCGTCCCCGCCTTCCTCTCTGTTTG 91861 >seq1223 Length=197574 Score = 87.8 bits (96), Expect = 1e-15 Identities = 110/150 (73%), Gaps = 1/150 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||||| | ||||| ||| || || ||| |||| || || || | Sbjct 1170 TCGAGTTGCAGACTCCGATCCGAACTGAGA-ACGGTTTTATAGATTCGCATCCTATCACT 1112 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | | || || ||||||| |||||||| ||||||| |||| | |||||||| Sbjct 1111 AGGTAGCTGCTCTCTGTACCGCCCATTGTAGCACGTGTGTGGCCCAGGACGTAAGGGCCG 1052 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTC 150 ||| || ||||||||||||||||||||||| Sbjct 1051 TGATGATTTGACGTCATCCCCACCTTCCTC 1022 >seq48204 Length=5524 Score = 77.0 bits (84), Expect = 3e-12 Identities = 59/70 (84%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 83 CCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCATGAGGACTTGACGTCATCCCCA 142 |||||||| | | ||||||||| | |||||||| ||||| || ||||| ||||||||| Sbjct 4306 CCATTGTAGCATGCGTGAAGCCCAAGACATAAGGGGCATGATGATTTGACCTCATCCCCA 4365 Query 143 CCTTCCTCCG 152 |||||||||| Sbjct 4366 CCTTCCTCCG 4375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415273648920