Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq48204 244 2e-62 seq89015 233 3e-59 seq5165 212 1e-52 seq1223 167 4e-39 seq21163 134 2e-29 seq140972 89.7 9e-16 >seq48204 Length=5524 Score = 244 bits (270), Expect = 2e-62 Identities = 228/290 (79%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||| ||||||| |||||||||||||||| | |||| ||| |||||||||| ||||| Sbjct 4775 CCCACCCTTTCGCTCCTCAGCGTCAGTTACGGCCCAGAGATCTGCCTTCGCCATCGGTGT 4834 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| |||||| |||||| ||||||||||| |||||||| || || || | |||| Sbjct 4835 TCCTCCTGATATCTGCGCATTCCACCGCTACACCAGGAATTCCAATCTCCCCTACCGCAC 4894 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || || | || | | |||| || ||||||||| ||||||||| | ||| Sbjct 4895 TCTAGTCTGCCCGTACCCACTGCAAGCCCGAGGTTGAGCCTCGGGTTTTCACAGCAGACG 4954 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | |||||||| || |||||| |||||||| ||||||||||||| || |||||| Sbjct 4955 CGACAGACCGCCTACGAGCTCTTTACGCCCAATAATTCCGGATAACGCTCGCACCCTACG 5014 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||||||||||||| |||| ||| |||||| Sbjct 5015 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTTTTCTGCAGGTA 5064 >seq89015 Length=3127 Score = 233 bits (258), Expect = 3e-59 Identities = 228/292 (78%), Gaps = 4/292 (1%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAG--CAATCCGCCTTCGCCACTGGT 58 |||| ||||||| ||||||||||||||| || |||| |||| |||||||| | ||| Sbjct 2665 CCCATGCTTTCGTGCCTCAGCGTCAGTTGTTGGCCAGTACAAT--GCCTTCGCTATCGGT 2722 Query 59 GTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGC 118 |||||| |||||| ||||||||||||||||| |||||| | || ||||| | Sbjct 2723 GTTCCTGATGGTATCTATGCATTTCACCGCTACACCATCAATTCCATGTACCCCTCCAAC 2782 Query 119 ACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGA 178 ||||||| | |||| |||| ||| || ||||||||| || |||||| |||| Sbjct 2783 ACTCAAGCCATCCAGTATCAACGGCACTGCATCGGTTGAGCCGATGTCTTTCACCGCTGA 2842 Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTA 238 ||| |||||||| | ||||||| |||||||||||||||| ||||||||| ||| Sbjct 2843 CTTAAACAGCCGCCTACGCACCCTTTAAACCCAATAAATCCGGACAACGCTTGCACCCTC 2902 Query 239 CGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||||||||||||| ||||||||| |||||||| || |||| Sbjct 2903 CGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTATTCATCTGGTA 2954 >seq5165 Length=98167 Score = 212 bits (234), Expect = 1e-52 Identities = 216/282 (77%), Gaps = 0/282 (0%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 ||||||| |||||||||||||||||| | |||| | |||||||||||||||||| Sbjct 34795 CCCACGCCTTCGCGCCTCAGCGTCAGATTTGAACCAGATAGACGCCTTCGCCACTGGTGT 34736 Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120 |||||| |||| |||| |||||||| |||||| |||||||| | ||||| | Sbjct 34735 TCCTCCTAATATTTACGAATTTCACCTCTACACTAGGAATTCCTCTATCCTCTTTCAATC 34676 Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180 || ||| | |||||| ||| |||| ||||||||| | |||||| | | ||| Sbjct 34675 TCTAGACTAGCAGTTTTAAAAGCAGTTCCAAGGTTGAGCCTTGGGATTTCACTTTTAACT 34616 Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240 | | ||||||||| |||||||||| |||||| | |||| |||||||| ||| || || Sbjct 34615 TACTAACCCGCCTACGCGCCCTTTACGCCCAATGATTCCGAATAACGCTAGCCCTCTCCG 34556 Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 |||||||||||||||||||||| |||||||| | ||| ||| Sbjct 34555 TATTACCGCGGCTGCTGGCACGGAGTTAGCCAGGACTTCTTC 34514 >seq1223 Length=197574 Score = 167 bits (184), Expect = 4e-39 Identities = 213/291 (73%), Gaps = 2/291 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTT-ACTGTCCAGCAATCCGCCTTCGCCACTGGTG 59 |||||||||||| | ||||||||| | | ||| || || | |||||||| | |||| Sbjct 627 CCCACGCTTTCGTCCATCAGCGTCAATCCATTGTT-AGTAACCTGCCTTCGCAATTGGTA 569 Query 60 TTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCA 119 |||| ||||||| ||||||||||||||||| |||| || | || | | | Sbjct 568 TTCCATGTAATATCTAAGCATTTCACCGCTACACTACATATTCTAGTTACTTCACAATAA 509 Query 120 CTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGAC 179 ||||| ||||| |||| ||| | | |||| |||| | | |||||| ||||| Sbjct 508 TTCAAGCCCTACAGTATCAATGGCAATTTTTTGGTTAAGCCAAAAACTTTCACCGCTGAC 449 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239 || |||||||| ||||||| ||||||| | ||||||||||||||| ||| | Sbjct 448 TTATAAGGCCGCCTACGGACCCTTTAAACCCAATGATTCCGGATAACGCTTGGATCCTCC 389 Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 ||||||||||||||||||||||| ||||||||| ||||||| | |||| Sbjct 388 GTATTACCGCGGCTGCTGGCACGGAGTTAGCCGATCCTTATTCTTACGGTA 338 >seq21163 Length=23524 Score = 134 bits (148), Expect = 2e-29 Identities = 175/238 (74%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60 |||||||||||| | ||||||||||||| || | | |||||||| | |||||| Sbjct 4953 CCCACGCTTTCGTCCATCAGCGTCAGTTAAGACATAGTGACCTGCCTTCGCAATTGGTGT 4894 Query 61 TCCTCCGTA-TATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCA 119 || | ||| |||||| ||||||||||||||||| ||||| | ||| | | Sbjct 4893 TC-TAAGTAATATCTATGCATTTCACCGCTACACTACTTATTCCAGCCACTTCTACCTTA 4835 Query 120 CTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGAC 179 ||||||| |||| |||| |||| | |||| |||| | || |||||| ||||| Sbjct 4834 CTCAAGACCTGCAGTATCAATGGCAGTTTTCCGGTTAAGCCGAAAGATTTCACCACTGAC 4775 Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCT 237 || | |||||||| ||||||| ||||||||||||||||||||||||| ||||| Sbjct 4774 TTACAGATCCGCCTACGGACCCTTTAAACCCAATAAATCCGGATAACGCTTG-CACCT 4718 >seq140972 Length=1238 Score = 89.7 bits (98), Expect = 9e-16 Identities = 200/294 (68%), Gaps = 10/294 (3%) Strand=Plus/Plus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCC-AGCAATCCGCCTTCGCCACTGGTG 59 |||| ||||||| ||||| |||||| | | | | || | |||| | ||||||||| Sbjct 467 CCCATGCTTTCGTTCCTCAATGTCAGTAAATATTCTAGATAACCGCTTCCGCCACTGGCA 526 Query 60 TTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGC- 118 ||||| | || ||||| | ||||||| || | | ||||| | || ||| | Sbjct 527 TTCCTTCATAGATCTATGGATTTCACTCCTCCCTATAAAATTCTG-TTATCTCATAATAT 585 Query 119 ACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCAT--AGTTTTCACATCT 176 ||||||| ||| ||| ||| | ||| | | || | || | |||||||| | Sbjct 586 ACTCAAGCAAAGGAGTATCATACGCATTTT-TAATTTTA----ATTAAACTTTCACATAT 640 Query 177 GACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACC 236 || || | |||| |||||||| |||||| | | |||||| ||| || || Sbjct 641 GAAAACATTTGCAATCTACGAACCCTTTACGCCCAATCATTTTGGATAATGCTCACCCCC 700 Query 237 TACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 | |||||||||||||||||||||||| |||||||| || || ||| | || || Sbjct 701 TTCGTATTACCGCGGCTGCTGGCACGAGGTTAGCCGGGGTTTCTTCTTTAGCTA 754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 827352885156