Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01001844.1
Length=290
Score E
Sequences producing significant alignments: (Bits) Value
seq48204 244 2e-62
seq89015 233 3e-59
seq5165 212 1e-52
seq1223 167 4e-39
seq21163 134 2e-29
seq140972 89.7 9e-16
>seq48204
Length=5524
Score = 244 bits (270), Expect = 2e-62
Identities = 228/290 (79%), Gaps = 0/290 (0%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||| ||||||| |||||||||||||||| | |||| ||| |||||||||| |||||
Sbjct 4775 CCCACCCTTTCGCTCCTCAGCGTCAGTTACGGCCCAGAGATCTGCCTTCGCCATCGGTGT 4834
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||||| |||||| |||||| ||||||||||| |||||||| || || || | ||||
Sbjct 4835 TCCTCCTGATATCTGCGCATTCCACCGCTACACCAGGAATTCCAATCTCCCCTACCGCAC 4894
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|| || | || | | |||| || ||||||||| ||||||||| | |||
Sbjct 4895 TCTAGTCTGCCCGTACCCACTGCAAGCCCGAGGTTGAGCCTCGGGTTTTCACAGCAGACG 4954
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240
| | |||||||| || |||||| |||||||| ||||||||||||| || ||||||
Sbjct 4955 CGACAGACCGCCTACGAGCTCTTTACGCCCAATAATTCCGGATAACGCTCGCACCCTACG 5014
Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||||||||||||||||||| |||| ||| ||||||
Sbjct 5015 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGGTGCTTTTTCTGCAGGTA 5064
>seq89015
Length=3127
Score = 233 bits (258), Expect = 3e-59
Identities = 228/292 (78%), Gaps = 4/292 (1%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAG--CAATCCGCCTTCGCCACTGGT 58
|||| ||||||| ||||||||||||||| || |||| |||| |||||||| | |||
Sbjct 2665 CCCATGCTTTCGTGCCTCAGCGTCAGTTGTTGGCCAGTACAAT--GCCTTCGCTATCGGT 2722
Query 59 GTTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGC 118
|||||| |||||| ||||||||||||||||| |||||| | || ||||| |
Sbjct 2723 GTTCCTGATGGTATCTATGCATTTCACCGCTACACCATCAATTCCATGTACCCCTCCAAC 2782
Query 119 ACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGA 178
||||||| | |||| |||| ||| || ||||||||| || |||||| ||||
Sbjct 2783 ACTCAAGCCATCCAGTATCAACGGCACTGCATCGGTTGAGCCGATGTCTTTCACCGCTGA 2842
Query 179 CTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTA 238
||| |||||||| | ||||||| |||||||||||||||| ||||||||| |||
Sbjct 2843 CTTAAACAGCCGCCTACGCACCCTTTAAACCCAATAAATCCGGACAACGCTTGCACCCTC 2902
Query 239 CGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
|||||||||||||||||||||||| ||||||||| |||||||| || ||||
Sbjct 2903 CGTATTACCGCGGCTGCTGGCACGGAGTTAGCCGGTGCTTATTCATCTGGTA 2954
>seq5165
Length=98167
Score = 212 bits (234), Expect = 1e-52
Identities = 216/282 (77%), Gaps = 0/282 (0%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
||||||| |||||||||||||||||| | |||| | ||||||||||||||||||
Sbjct 34795 CCCACGCCTTCGCGCCTCAGCGTCAGATTTGAACCAGATAGACGCCTTCGCCACTGGTGT 34736
Query 61 TCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCAC 120
|||||| |||| |||| |||||||| |||||| |||||||| | ||||| |
Sbjct 34735 TCCTCCTAATATTTACGAATTTCACCTCTACACTAGGAATTCCTCTATCCTCTTTCAATC 34676
Query 121 TCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACT 180
|| ||| | |||||| ||| |||| ||||||||| | |||||| | | |||
Sbjct 34675 TCTAGACTAGCAGTTTTAAAAGCAGTTCCAAGGTTGAGCCTTGGGATTTCACTTTTAACT 34616
Query 181 TGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACG 240
| | ||||||||| |||||||||| |||||| | |||| |||||||| ||| || ||
Sbjct 34615 TACTAACCCGCCTACGCGCCCTTTACGCCCAATGATTCCGAATAACGCTAGCCCTCTCCG 34556
Query 241 TATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282
|||||||||||||||||||||| |||||||| | ||| |||
Sbjct 34555 TATTACCGCGGCTGCTGGCACGGAGTTAGCCAGGACTTCTTC 34514
>seq1223
Length=197574
Score = 167 bits (184), Expect = 4e-39
Identities = 213/291 (73%), Gaps = 2/291 (1%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTT-ACTGTCCAGCAATCCGCCTTCGCCACTGGTG 59
|||||||||||| | ||||||||| | | ||| || || | |||||||| | ||||
Sbjct 627 CCCACGCTTTCGTCCATCAGCGTCAATCCATTGTT-AGTAACCTGCCTTCGCAATTGGTA 569
Query 60 TTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCA 119
|||| ||||||| ||||||||||||||||| |||| || | || | | |
Sbjct 568 TTCCATGTAATATCTAAGCATTTCACCGCTACACTACATATTCTAGTTACTTCACAATAA 509
Query 120 CTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGAC 179
||||| ||||| |||| ||| | | |||| |||| | | |||||| |||||
Sbjct 508 TTCAAGCCCTACAGTATCAATGGCAATTTTTTGGTTAAGCCAAAAACTTTCACCGCTGAC 449
Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTAC 239
|| |||||||| ||||||| ||||||| | ||||||||||||||| ||| |
Sbjct 448 TTATAAGGCCGCCTACGGACCCTTTAAACCCAATGATTCCGGATAACGCTTGGATCCTCC 389
Query 240 GTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
||||||||||||||||||||||| ||||||||| ||||||| | ||||
Sbjct 388 GTATTACCGCGGCTGCTGGCACGGAGTTAGCCGATCCTTATTCTTACGGTA 338
>seq21163
Length=23524
Score = 134 bits (148), Expect = 2e-29
Identities = 175/238 (74%), Gaps = 3/238 (1%)
Strand=Plus/Minus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGT 60
|||||||||||| | ||||||||||||| || | | |||||||| | ||||||
Sbjct 4953 CCCACGCTTTCGTCCATCAGCGTCAGTTAAGACATAGTGACCTGCCTTCGCAATTGGTGT 4894
Query 61 TCCTCCGTA-TATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCA 119
|| | ||| |||||| ||||||||||||||||| ||||| | ||| | |
Sbjct 4893 TC-TAAGTAATATCTATGCATTTCACCGCTACACTACTTATTCCAGCCACTTCTACCTTA 4835
Query 120 CTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGAC 179
||||||| |||| |||| |||| | |||| |||| | || |||||| |||||
Sbjct 4834 CTCAAGACCTGCAGTATCAATGGCAGTTTTCCGGTTAAGCCGAAAGATTTCACCACTGAC 4775
Query 180 TTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCT 237
|| | |||||||| ||||||| ||||||||||||||||||||||||| |||||
Sbjct 4774 TTACAGATCCGCCTACGGACCCTTTAAACCCAATAAATCCGGATAACGCTTG-CACCT 4718
>seq140972
Length=1238
Score = 89.7 bits (98), Expect = 9e-16
Identities = 200/294 (68%), Gaps = 10/294 (3%)
Strand=Plus/Plus
Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCC-AGCAATCCGCCTTCGCCACTGGTG 59
|||| ||||||| ||||| |||||| | | | | || | |||| | |||||||||
Sbjct 467 CCCATGCTTTCGTTCCTCAATGTCAGTAAATATTCTAGATAACCGCTTCCGCCACTGGCA 526
Query 60 TTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGC- 118
||||| | || ||||| | ||||||| || | | ||||| | || ||| |
Sbjct 527 TTCCTTCATAGATCTATGGATTTCACTCCTCCCTATAAAATTCTG-TTATCTCATAATAT 585
Query 119 ACTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCAT--AGTTTTCACATCT 176
||||||| ||| ||| ||| | ||| | | || | || | |||||||| |
Sbjct 586 ACTCAAGCAAAGGAGTATCATACGCATTTT-TAATTTTA----ATTAAACTTTCACATAT 640
Query 177 GACTTGCCTTCCCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACC 236
|| || | |||| |||||||| |||||| | | |||||| ||| || ||
Sbjct 641 GAAAACATTTGCAATCTACGAACCCTTTACGCCCAATCATTTTGGATAATGCTCACCCCC 700
Query 237 TACGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTCCTCAGGTA 290
| |||||||||||||||||||||||| |||||||| || || ||| | || ||
Sbjct 701 TTCGTATTACCGCGGCTGCTGGCACGAGGTTAGCCGGGGTTTCTTCTTTAGCTA 754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 827352885156
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |