Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq180232 228 8e-58 seq180235 217 2e-54 seq79288 190 2e-46 seq180226 140 3e-31 >seq180232 Length=366 Score = 228 bits (252), Expect = 8e-58 Identities = 164/188 (87%), Gaps = 1/188 (1%) Strand=Plus/Minus Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60 ||||||| ||||||||||||||||||||||||| | ||||||||||| ||||| |||||| Sbjct 234 GGAACCAAGACTTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCATTTGCCCGAATA 175 Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120 |||| |||||||||||| ||||||||||||||||||||||||| ||||||||| | || Sbjct 174 TATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAATCG- 116 Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180 |||||||||| |||| ||| ||| ||||| | |||||||| || | ||||||||||| Sbjct 115 CCGTAATGATTAATAGGGACAGTTGGGGGCATTAGTATTCACATGCTAGAGGTGAAATTC 56 Query 181 TTGGATTT 188 |||||||| Sbjct 55 TTGGATTT 48 >seq180235 Length=224 Score = 217 bits (240), Expect = 2e-54 Identities = 155/177 (88%), Gaps = 1/177 (1%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGA 72 ||||||||||||||||||||| ||||||||||||||| ||| |||||| |||| |||||| Sbjct 224 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATATATTAGCATGGA 165 Query 73 ATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131 |||||||||||||||| |||||| ||||||||| ||||||||||| | |||||||||| Sbjct 164 ATAATAGAATAGGACGTTGCGGTCCTATTTTGTTGGTTTCTAGGATCCGCCGTAATGATT 105 Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188 |||| ||||||||||||| | ||||||| || | ||||||||||||||||||| Sbjct 104 AATAGGGATAGTCGGGGGCATTCGTATTCACATGCTAGAGGTGAAATTCTTGGATTT 48 >seq79288 Length=336 Score = 190 bits (210), Expect = 2e-46 Identities = 160/194 (82%), Gaps = 3/194 (2%) Strand=Plus/Plus Query 1 GGAACCAGGA-CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTT--TGCTCGA 57 ||||||| || || |||| ||||||||||||||| ||||||||||||| | ||| || Sbjct 99 GGAACCATGAACTGTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCTATGATGCCGGA 158 Query 58 ATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC 117 |||||||| ||||||||||| |||||||||||||| ||||||||| ||||||||||| Sbjct 159 ATACATTAGCATGGAATAATGAAATAGGACGTGCGGACCTATTTTGTTGGTTTCTAGGAG 218 Query 118 CGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAA 177 | |||||||||| |||| |||||| |||||| | ||||||||| | | ||||||| Sbjct 219 CCGCCGTAATGATTAATAGGGATAGCCGGGGGCATTTGTATTCAATGGCAAGGGGTGAAA 278 Query 178 TTCTTGGATTTATT 191 | |||||||| ||| Sbjct 279 TCCTTGGATTCATT 292 >seq180226 Length=541 Score = 140 bits (154), Expect = 3e-31 Identities = 142/182 (78%), Gaps = 10/182 (5%) Strand=Plus/Plus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC---GAATACATTACCAT 69 |||||| ||| ||| ||||| ||||||||||| | || || |||||| ||| ||| Sbjct 145 TTTACTGTGAGTAAAATAGAGTGTTCAAAGCAGACATTATGTCAATGAATACGTTAGCAT 204 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG-TAATG 128 ||||||||| ||||||| | | |||||||||| ||||| ||| | | ||||| Sbjct 205 GGAATAATAAGATAGGACCTTGG--TCTATTTTGTTGGTTT----GACTCCAAGGTAATG 258 Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188 || |||| ||| ||| |||||| | |||||||||||||| ||||||||||||||||||| Sbjct 259 ATTAATAGGGACAGTTGGGGGTATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 318 Query 189 AT 190 || Sbjct 319 AT 320 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511106029440