Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq180232 228 8e-58
seq180235 217 2e-54
seq79288 190 2e-46
seq180226 140 3e-31
>seq180232
Length=366
Score = 228 bits (252), Expect = 8e-58
Identities = 164/188 (87%), Gaps = 1/188 (1%)
Strand=Plus/Minus
Query 1 GGAACCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATA 60
||||||| ||||||||||||||||||||||||| | ||||||||||| ||||| ||||||
Sbjct 234 GGAACCAAGACTTTTACTTTGAAAAAATTAGAGTGCTCAAAGCAGGCATTTGCCCGAATA 175
Query 61 CATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGC 120
|||| |||||||||||| ||||||||||||||||||||||||| ||||||||| | ||
Sbjct 174 TATTAGCATGGAATAATAAAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGAATCG- 116
Query 121 CCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTC 180
|||||||||| |||| ||| ||| ||||| | |||||||| || | |||||||||||
Sbjct 115 CCGTAATGATTAATAGGGACAGTTGGGGGCATTAGTATTCACATGCTAGAGGTGAAATTC 56
Query 181 TTGGATTT 188
||||||||
Sbjct 55 TTGGATTT 48
>seq180235
Length=224
Score = 217 bits (240), Expect = 2e-54
Identities = 155/177 (88%), Gaps = 1/177 (1%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGA 72
||||||||||||||||||||| ||||||||||||||| ||| |||||| |||| ||||||
Sbjct 224 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTATGCCCGAATATATTAGCATGGA 165
Query 73 ATAATAGAATAGGACG-TGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATA 131
|||||||||||||||| |||||| ||||||||| ||||||||||| | ||||||||||
Sbjct 164 ATAATAGAATAGGACGTTGCGGTCCTATTTTGTTGGTTTCTAGGATCCGCCGTAATGATT 105
Query 132 AATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188
|||| ||||||||||||| | ||||||| || | |||||||||||||||||||
Sbjct 104 AATAGGGATAGTCGGGGGCATTCGTATTCACATGCTAGAGGTGAAATTCTTGGATTT 48
>seq79288
Length=336
Score = 190 bits (210), Expect = 2e-46
Identities = 160/194 (82%), Gaps = 3/194 (2%)
Strand=Plus/Plus
Query 1 GGAACCAGGA-CTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTT--TGCTCGA 57
||||||| || || |||| ||||||||||||||| ||||||||||||| | ||| ||
Sbjct 99 GGAACCATGAACTGTTACCTTGAAAAAATTAGAGTGTTCAAAGCAGGCTATGATGCCGGA 158
Query 58 ATACATTACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGAC 117
|||||||| ||||||||||| |||||||||||||| ||||||||| |||||||||||
Sbjct 159 ATACATTAGCATGGAATAATGAAATAGGACGTGCGGACCTATTTTGTTGGTTTCTAGGAG 218
Query 118 CGCCCGTAATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAA 177
| |||||||||| |||| |||||| |||||| | ||||||||| | | |||||||
Sbjct 219 CCGCCGTAATGATTAATAGGGATAGCCGGGGGCATTTGTATTCAATGGCAAGGGGTGAAA 278
Query 178 TTCTTGGATTTATT 191
| |||||||| |||
Sbjct 279 TCCTTGGATTCATT 292
>seq180226
Length=541
Score = 140 bits (154), Expect = 3e-31
Identities = 142/182 (78%), Gaps = 10/182 (5%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTC---GAATACATTACCAT 69
|||||| ||| ||| ||||| ||||||||||| | || || |||||| ||| |||
Sbjct 145 TTTACTGTGAGTAAAATAGAGTGTTCAAAGCAGACATTATGTCAATGAATACGTTAGCAT 204
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCG-TAATG 128
||||||||| ||||||| | | |||||||||| ||||| ||| | | |||||
Sbjct 205 GGAATAATAAGATAGGACCTTGG--TCTATTTTGTTGGTTT----GACTCCAAGGTAATG 258
Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTT 188
|| |||| ||| ||| |||||| | |||||||||||||| |||||||||||||||||||
Sbjct 259 ATTAATAGGGACAGTTGGGGGTATTCGTATTCAATTGTCAGAGGTGAAATTCTTGGATTT 318
Query 189 AT 190
||
Sbjct 319 AT 320
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511106029440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |