Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01001962.1
Length=275
Score E
Sequences producing significant alignments: (Bits) Value
seq4656 311 1e-82
seq4984 279 8e-73
seq21163 224 2e-56
seq156376 181 2e-43
seq111198 77.0 5e-12
>seq4656
Length=104629
Score = 311 bits (344), Expect = 1e-82
Identities = 228/265 (86%), Gaps = 0/265 (0%)
Strand=Plus/Plus
Query 11 TTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACT 70
|||| ||||||||| |||||| |||||| | || || ||||| ||| || | |||
Sbjct 93820 TTCGCACTTAGATGCTTTCAGCGCTTATCTATCCCGGACGTAGCTACCCTGCCGTACACC 93879
Query 71 TGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAG 130
|||| | | ||| ||| |||||| ||| ||||| ||||||||||||||||||||| |||
Sbjct 93880 TGGCGGCATAACAGGTTCACCAGCGGTCCGTCCAACCCGGTCCTCTCGTACTAAGGTCAG 93939
Query 131 CTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTG 190
||| |||||| |||| ||||||| || |||||||||||||||||||||||||||||||
Sbjct 93940 ATCCACTCAAACTTCCAGCGCCCACAACAGATAGGGACCGAACTGTCTCGCGACGTTCTG 93999
Query 191 AACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACCTACTTCAGC 250
||||||||||||||||| |||||||||||||||||||||||||||||||||| || ||||
Sbjct 94000 AACCCAGCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACCCTTGGGACCTTCTCCAGC 94059
Query 251 CCCAGGATGAGACGAGCCGACATCG 275
||||||||| |||||||||||||||
Sbjct 94060 CCCAGGATGTGACGAGCCGACATCG 94084
>seq4984
Length=100180
Score = 279 bits (308), Expect = 8e-73
Identities = 226/274 (82%), Gaps = 0/274 (0%)
Strand=Plus/Plus
Query 2 GAGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAG 61
|| ||||| ||| ||||| |||| |||||| ||||||| || | || ||||| |||||
Sbjct 67315 GAAGAGGGTTTCTTGCTTATATGCTTTCAGCAATTATCCCATCTATACATAGCTACCCAG 67374
Query 62 CTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTAC 121
| |||| |||||| ||| ||||| |||||||||| | |||||| ||||||||||||||
Sbjct 67375 CGATGCTATTGGCATAACAGCTGGTACACCAGAGGTATATCCATCTCGGTCCTCTCGTAC 67434
Query 122 TAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGC 181
|| | ||| | ||||||||||||| | |||||| | ||||| ||||||||||||| |
Sbjct 67435 TAGAGTCAGACCTTCTCAAATTTCCTTCACCCACGGCAGATAGAAACCGAACTGTCTCAC 67494
Query 182 GACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCCTTGGGACC 241
|||||||| |||||| ||| ||| | ||||||| ||||||||||| |||||||||||||
Sbjct 67495 GACGTTCTAAACCCAACTCACGTATCACTTTAATCGGCGAACAGCCGAACCCTTGGGACC 67554
Query 242 TACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275
| |||||||||||||||| || ||| ||||||||
Sbjct 67555 TTCTTCAGCCCCAGGATGTGATGAGTCGACATCG 67588
>seq21163
Length=23524
Score = 224 bits (248), Expect = 2e-56
Identities = 180/217 (83%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 17 CTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCAG 76
|||| |||| ||||| ||||| ||||||||| ||||| | |||| ||||| |||| |
Sbjct 9801 CTTATATGCTTTCAGTGTTTATCTCTTCCAAACATAGCTACTCAGCGGTGCACCTGGCGG 9742
Query 77 TACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCTC 136
|||||||| | |||||||||||||| || |||||||||||||||| || ||||
Sbjct 9741 TACAACTGATACACCAGAGGTTTGTTCAATTCGGTCCTCTCGTACTAGAATCAAGCCCTC 9682
Query 137 TCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCCA 196
||||| || |||||| | | ||||| |||||||||||||| ||||||||||||||||
Sbjct 9681 TCAAACATCTAACGCCCGCAATAGATAGAGACCGAACTGTCTCACGACGTTCTGAACCCA 9622
Query 197 GCTCGCGTGCCTCTTTAATGGGCGAACAGCCCAACCC 233
||||||||||| |||||||||||||||||||||||||
Sbjct 9621 GCTCGCGTGCCACTTTAATGGGCGAACAGCCCAACCC 9585
>seq156376
Length=1124
Score = 181 bits (200), Expect = 2e-43
Identities = 151/185 (82%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 16 GCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGCTATGCACTTGGCA 75
|||||||||| |||||| ||||| ||||| | |||||| ||| || |||| ||||
Sbjct 185 GCTTAGATGCTTTCAGCGTTTATCTCTTCCGTATTTAGCTACCCGGCAATGCCACTGGCG 126
Query 76 GTACAACTGGTGCACCAGAGGTTTGTCCATCCCGGTCCTCTCGTACTAAGGACAGCTCCT 135
||||| ||| |||||||| | |||||| ||||||||||||||||| | ||||| ||
Sbjct 125 TGACAACCGGTACACCAGAGATACGTCCATTCCGGTCCTCTCGTACTAGGAACAGCCCCC 66
Query 136 CTCAAATTTCCTACGCCCACGACGGATAGGGACCGAACTGTCTCGCGACGTTCTGAACCC 195
|||||||||| ||||||||| | |||||||||| ||||||||| ||||||| | |||||
Sbjct 65 TTCAAATTTCCAACGCCCACGGCAGATAGGGACCAAACTGTCTCACGACGTTTTAAACCC 6
Query 196 AGCTC 200
|||||
Sbjct 5 AGCTC 1
>seq111198
Length=1666
Score = 77.0 bits (84), Expect = 5e-12
Identities = 74/95 (78%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 3 AGGAGGGCTTCGGGCTTAGATGCCTTCAGCTCTTATCCCTTCCAAACTTAGCTTCCCAGC 62
||| ||| ||| ||||||||||||||||| ||||||| |||| || ||||| ||| ||
Sbjct 95 AGGTGGGTTTCCCGCTTAGATGCCTTCAGCGGTTATCCCGTCCATACATAGCTACCCTGC 36
Query 63 TATGCACTTGGCAGTACAACTGGTGCACCAGAGGT 97
||| |||| ||||| ||| ||||||||||
Sbjct 35 ACTGCGGCTGGCGCCACAACAGGTCCACCAGAGGT 1
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 779436694896
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |