Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01002002.1 Length=198 Score E Sequences producing significant alignments: (Bits) Value seq79211 176 5e-42 seq103 147 2e-33 >seq79211 Length=4555 Score = 176 bits (194), Expect = 5e-42 Identities = 144/174 (83%), Gaps = 1/174 (1%) Strand=Plus/Plus Query 1 TGCTGACCAACATCGCCCGCCTGATGGACAAGGAAGGCAAGGTGTTGACCGGCTTCGACC 60 ||||||||||||||||| |||||||||||||| | ||| | ||| ||||||| | |||| Sbjct 222 TGCTGACCAACATCGCCGGCCTGATGGACAAGCAGGGCGAAGTGCTGACCGGGCT-GACC 280 Query 61 ACGCAACAAGTGGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAAG 120 || |||| || ||| ||||||||||||||| |||||||| |||||||||||||||||| Sbjct 281 ACCGAACAGGTCGACAGCCTGATCGCCGACGGGACCATCTATGGCGGCATGCTGCCGAAG 340 Query 121 ATCCGTTGCGCACTGGAAGCAGTGCAAGGCGGCGTGGGCAGCTCGCTGATCCTC 174 ||| ||||| ||||| || ||||| || |||||| |||||||| ||| || Sbjct 341 ATCAAGTGCGCCCTGGAGGCGGTGCAGGGTGGCGTGACCAGCTCGCACATCATC 394 >seq103 Length=407632 Score = 147 bits (162), Expect = 2e-33 Identities = 140/175 (80%), Gaps = 3/175 (2%) Strand=Plus/Minus Query 1 TGCTGACCAACATCGCCCGCCTGATGGACAAGGA-AGGCAAGGTGTTGACCGGCTTCGAC 59 |||| ||||||||| | || | ||| ||||||| | ||| |||| |||||||| | || Sbjct 365476 TGCTCACCAACATCCCGGGCGTCATGAACAAGGACAAGCA-GGTGCTGACCGGCCT-GAT 365419 Query 60 CACGCAACAAGTGGACGACCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAA 119 |||||| | || || | |||||||||||||||||||||||||||||||||||||||||| Sbjct 365418 CACGCAGGATGTCGATGCCCTGATCGCCGACGGCACCATCTACGGCGGCATGCTGCCGAA 365359 Query 120 GATCCGTTGCGCACTGGAAGCAGTGCAAGGCGGCGTGGGCAGCTCGCTGATCCTC 174 |||| ||||| ||||| || ||| | ||||||||| ||| ||| ||| || Sbjct 365358 GATCGCCTGCGCGCTGGACGCGGTGAAGGGCGGCGTGCAGAGCGCGCACATCATC 365304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533466918228