Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01002011.1 Length=284 Score E Sequences producing significant alignments: (Bits) Value seq160690 286 6e-75 seq4 188 1e-45 seq5 150 3e-34 seq59626 105 1e-20 seq363 87.8 3e-15 >seq160690 Length=1098 Score = 286 bits (316), Expect = 6e-75 Identities = 213/248 (86%), Gaps = 1/248 (0%) Strand=Plus/Minus Query 1 TACGCCTTGCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCT 60 |||||| |||| |||||||||||||| |||||||| || || |||| || |||||| || Sbjct 247 TACGCCCTGCGACCGCTGGATTTCGCCGTGTTCCCCACC-ATCCTGCTGGCGGCGACGCT 189 Query 61 GCTACGTCTGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGG 120 ||| || ||||| ||||||| || |||||||| |||||| ||||| |||| || || || Sbjct 188 GCTGCGCCTGGCGCTGAACGTGGCGTCCACGCGCGTGGTGCTGCTCAACGGTCACGAGGG 129 Query 121 CCATGCCGCTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTA 180 |||| ||| || || ||||||||||||||||||| ||||||||||||||||| ||||| Sbjct 128 GCATGGCGCGGCGGGGCAGGTGATCCAGGCCTTCGGCGAGGTGGTGATCGGCGGCAACTA 69 Query 181 CGTGGTCGGTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAA 240 |||||||||||||||||||||||| ||||| |||||||||||||| |||||||| ||||| Sbjct 68 CGTGGTCGGTATCGTGGTGTTCGCCATCCTCATGATCATCAACTTCGTGGTGGTCACCAA 9 Query 241 GGGCGCCG 248 ||| |||| Sbjct 8 GGGTGCCG 1 >seq4 Length=924746 Score = 188 bits (208), Expect = 1e-45 Identities = 208/276 (75%), Gaps = 1/276 (0%) Strand=Plus/Plus Query 9 GCGGCCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTC 68 |||||| |||| ||| | |||||||| | |||| ||| || || ||||| || | Sbjct 402161 GCGGCCCATGGACTTCAGCGCCTTCCCGACCG-TGCTGCTGGTCGCCACGCTGCTGCGCC 402219 Query 69 TGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCG 128 ||| ||||||| ||||| ||||| |||||| || | | ||||| | |||| | || Sbjct 402220 TGGGCCTGAACGTGGCCTCGACGCGCGTGGTGCTGATGGAGGGCCACCAGGGCCCGGGCG 402279 Query 129 CTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCG 188 | ||||| |||| ||| |||||||||| | | | |||||||| || | || ||||| Sbjct 402280 CCGCCGGCCAGGTCATCGAGGCCTTCGGCCACTTCATCATCGGCGGCAATTTCGCGGTCG 402339 Query 189 GTATCGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCG 248 | || ||||| ||||| || ||| ||||||||||||| ||||||||||||||||||||| Sbjct 402340 GCATTGTGGTCTTCGCCATTCTGGTGATCATCAACTTCATGGTGGTGACCAAGGGCGCCG 402399 Query 249 GGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCTCG 284 | || | || || |||| |||||| || ||||||| Sbjct 402400 GCCGTGTCTCGGAAGTGACCGCGCGCTTCACCCTCG 402435 >seq5 Length=869209 Score = 150 bits (166), Expect = 3e-34 Identities = 196/270 (73%), Gaps = 1/270 (0%) Strand=Plus/Plus Query 13 CCGCTGGATTTCGCGGTGTTCCCGACGTATTCTGCAGGTGGCGACCCTGCTACGTCTGGC 72 ||||||||||| | | || || | | | |||| |||||| ||| | || ||| | || Sbjct 167630 CCGCTGGATTTTGGTATTTTTCCCA-GCGTGCTGCTGGTGGCAACCATTCTGCGTTTAGC 167688 Query 73 ATTGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCGCTGC 132 ||||||| ||| ||| ||||||||| | || | ||||| |||| || ||| || Sbjct 167689 GCTGAACGTTGCCAGCACCCGGGTGGTGTTACTTGAAGGCCATAACGGTGGTGACGCCGC 167748 Query 133 CGGTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCGGTAT 192 ||| || || | || ||||| |||||| || ||||||||||| | || ||||| Sbjct 167749 GGGTGCCGTCATTGAAGCTTTCGGCTCGGTGGTAATTGGCGGTAACTATGCCGTTGGTAT 167808 Query 193 CGTGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCGGGCG 252 ||| || ||| |||| | || ||||||||||||||||||||||||||||| ||||| || Sbjct 167809 CGTTGTATTCCTGATCTTAATTATCATCAACTTTGTGGTGGTGACCAAGGGTGCCGGTCG 167868 Query 253 GATTTCCGAGGTGAGCGCGCGGTTTACCCT 282 || | || ||| || || ||||| || Sbjct 167869 CATCGCTGAAGTGTCAGCCCGTTTTACGCT 167898 >seq59626 Length=6005 Score = 105 bits (116), Expect = 1e-20 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 75 TGAACGTCGCCTCCACGCGGGTGGTGATGCTCCACGGCCAGGACGGCCATGCCGCTGCCG 134 |||| |||||| || || || || | ||| | || || ||||| || || |||| Sbjct 2844 TGAATGTCGCCAGTACCCGTGTAGTATTACTCGAAGGTCATAACGGCGGTGATGCAGCCG 2903 Query 135 GTAAGGTGATCCAGGCCTTCGGTGAGGTGGTGATCGGCGGTAACTACGTGGTCGGTATCG 194 |||| || ||| ||||||| || |||||| |||||||||||||| | || ||| | | Sbjct 2904 GTAAAGTTATCGAGGCCTTTGGCTCGGTGGTTATCGGCGGTAACTATGCCGTTGGTTTAG 2963 Query 195 TGGTGTTCGCGATCCTGATGATCATCAACTTTGTGGTGGTGACCAAGGGCGCCGGGCGGA 254 |||| ||| ||| | || || || ||||||||||| | ||||| || || || || | Sbjct 2964 TGGTCTTCCTGATTTTAATCATTATTAACTTTGTGGTTATCACCAAAGGTGCAGGTCGTA 3023 Query 255 TTTCCGAGGTGAGCGCGCGGTTTACCCT 282 |||| || || || || ||||| || Sbjct 3024 TTTCTGAAGTATCAGCTCGCTTTACTCT 3051 >seq363 Length=289854 Score = 87.8 bits (96), Expect = 3e-15 Identities = 161/238 (68%), Gaps = 15/238 (6%) Strand=Plus/Minus Query 45 TGCAGGTGGCGACCCTGCTACGTCTGGCATTGAACGTCGCCTCCACGCGGGTGGTGATGC 104 ||| |||| | || ||| | || ||||| ||||||| ||| |||| || || || | Sbjct 28202 TGCTGGTGACCACGCTGTTCCGCCTGGCGCTGAACGTGGCCGCCACCCGCCTG---ATCC 28146 Query 105 TCCACGGCCAGGACGGCCATGCCGCTGCCGGTAAGGTGATCCAGGCCTTCGGTGAGGTGG 164 || || ||| || |||||| ||||| ||| ||| ||||| | | Sbjct 28145 TCACCG------------ATGGCGATGCCGGCAAGGTCATCGGCGCCGTCGGTTCGCATG 28098 Query 165 TGATCGGCGGTAACTACGTGGTCGGTATCGTGGTGTTCGCGATCCTGATGATCATCAACT 224 || | ||||| |||||| | ||||| ||||||||||| ||||||| || | | | | Sbjct 28097 TGGTGGGCGGCAACTACATCATCGGTTTCGTGGTGTTCCTGATCCTGGTGGTGGTGCAGT 28038 Query 225 TTGTGGTGGTGACCAAGGGCGCCGGGCGGATTTCCGAGGTGAGCGCGCGGTTTACCCT 282 |||||||| |||| |||||| ||| | |||||||| ||||| || ||||| Sbjct 28037 ACGTGGTGGTCACCAGCGGCGCCCAGCGCGTCGCCGAGGTGGCAGCGCGCTTCACCCT 27980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 808186409052