Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01002051.1 Length=353 Score E Sequences producing significant alignments: (Bits) Value seq136120 376 5e-102 seq26 178 3e-42 >seq136120 Length=1281 Score = 376 bits (416), Expect = 5e-102 Identities = 295/353 (84%), Gaps = 0/353 (0%) Strand=Plus/Plus Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60 ||||||||||||||| || || ||||||||||||||||| || ||||| |||||||| Sbjct 161 CGACCGCCTGCGCCACGTCGCCGAGCGCGCCGAGCTGGGCGAGAAGCGCGAGGCGATCAT 220 Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCGTTCTGCGAGGCCGTGGGCAA 120 |||||||||||| |||||| |||| ||||| |||||||| ||||||||||| |||||||| Sbjct 221 CGCCGTGACCATCCCCGAGCAGCCGGGCAGTTTCAAGGCCTTCTGCGAGGCGGTGGGCAA 280 Query 121 GCGCCAGATCACCGAATTCAACTACCGTTTCCACTCCGGCAGCGAGGCGCACATCTTTGT 180 ||||||||||||||| ||||||||||| | ||| ||| | |||||||||| ||||| || Sbjct 281 GCGCCAGATCACCGAGTTCAACTACCGCTATCACACCGACCGCGAGGCGCATATCTTCGT 340 Query 181 CGGCGTGCAGACCCACCCCGACACCGACCCCCGCAGCGCGCTGATCGCCAGCCTGACCGA 240 ||||||||||||||| || || | ||| || ||| |||||| ||| ||||| | Sbjct 341 CGGCGTGCAGACCCATCCGGAGAACGATCCGCGCCAGGCGCTGGTCGAGGGCCTGCGTGC 400 Query 241 GCAGGGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTGGCCAAGCTGCACATCCGCCA 300 |||||| ||||||||||||||||||||||| || || ||||||||||||||||||||||| Sbjct 401 GCAGGGCTTCCCGGTGCTGGACCTGACCGACAACGAACTGGCCAAGCTGCACATCCGCCA 460 Query 301 TATGGTCGGCGGCCATGCGGCGCACGTCAGCAATGAAGTGGTGTTCCGCTTCG 353 ||||||||||| ||| |||| || ||||| || ||||| | ||||||| Sbjct 461 CATGGTCGGCGGTCATTCGGCCGGGGTGAGCAACGAGATGGTGCTGCGCTTCG 513 >seq26 Length=549101 Score = 178 bits (196), Expect = 3e-42 Identities = 236/322 (73%), Gaps = 8/322 (2%) Strand=Plus/Plus Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60 ||||||||||||||| | || || ||| ||||||| || || ||||||| || | | Sbjct 186383 CGACCGCCTGCGCCACATCGCCGAACGCACCGAGCTCGGCGAGCGCCGCGAGGCCGTGCT 186442 Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCGTTCTGCGAGGCCGTGGGCAA 120 || ||||||||||| ||| |||| ||| ||||||||||||||| ||||| | ||||| Sbjct 186443 GGCGGTGACCATTCCGGAGCAGCCGGGCGCGTTCAAGGCGTTCTGCCAGGCCATCGGCAA 186502 Query 121 GCGCCAGATCACCGAATTCAACTACCGTTTCCACTCCGGCAGCGAGGCGCACATCTTTGT 180 |||| | ||||||||||||||||||| | | | | | ||| |||||| | || || Sbjct 186503 GCGCAATGTCACCGAATTCAACTACCGCTACAGCGATGCCGGCGCCGCGCACGTGTTCGT 186562 Query 181 CGGCGT---GCAGACCCACCCCGACACCGACCCCCGCAGCGCGCTGATCGCCAGCCTGAC 237 |||||| || | | | ||||| ||| | | ||| | |||| ||| | ||||| | Sbjct 186563 CGGCGTGTCGCTGCGCGGCGGCGACAGCGAGCGC--CAG-GAGCTGGTCGGCGGCCTG-C 186618 Query 238 CGAGC-AGGGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTGGCCAAGCTGCACATCC 296 | || |||| | | ||||| |||||| |||| | || ||||||||||||| | | Sbjct 186619 AGCGCAAGGGCTATGCCGTGCTCGACCTGTCCGACGACGAAATGGCCAAGCTGCATGTGC 186678 Query 297 GCCATATGGTCGGCGGCCATGC 318 | || ||||||||||||| || Sbjct 186679 GGCACCTGGTCGGCGGCCACGC 186700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1025348615808