Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01002051.1
Length=353
Score E
Sequences producing significant alignments: (Bits) Value
seq136120 376 5e-102
seq26 178 3e-42
>seq136120
Length=1281
Score = 376 bits (416), Expect = 5e-102
Identities = 295/353 (84%), Gaps = 0/353 (0%)
Strand=Plus/Plus
Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60
||||||||||||||| || || ||||||||||||||||| || ||||| ||||||||
Sbjct 161 CGACCGCCTGCGCCACGTCGCCGAGCGCGCCGAGCTGGGCGAGAAGCGCGAGGCGATCAT 220
Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCGTTCTGCGAGGCCGTGGGCAA 120
|||||||||||| |||||| |||| ||||| |||||||| ||||||||||| ||||||||
Sbjct 221 CGCCGTGACCATCCCCGAGCAGCCGGGCAGTTTCAAGGCCTTCTGCGAGGCGGTGGGCAA 280
Query 121 GCGCCAGATCACCGAATTCAACTACCGTTTCCACTCCGGCAGCGAGGCGCACATCTTTGT 180
||||||||||||||| ||||||||||| | ||| ||| | |||||||||| ||||| ||
Sbjct 281 GCGCCAGATCACCGAGTTCAACTACCGCTATCACACCGACCGCGAGGCGCATATCTTCGT 340
Query 181 CGGCGTGCAGACCCACCCCGACACCGACCCCCGCAGCGCGCTGATCGCCAGCCTGACCGA 240
||||||||||||||| || || | ||| || ||| |||||| ||| ||||| |
Sbjct 341 CGGCGTGCAGACCCATCCGGAGAACGATCCGCGCCAGGCGCTGGTCGAGGGCCTGCGTGC 400
Query 241 GCAGGGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTGGCCAAGCTGCACATCCGCCA 300
|||||| ||||||||||||||||||||||| || || |||||||||||||||||||||||
Sbjct 401 GCAGGGCTTCCCGGTGCTGGACCTGACCGACAACGAACTGGCCAAGCTGCACATCCGCCA 460
Query 301 TATGGTCGGCGGCCATGCGGCGCACGTCAGCAATGAAGTGGTGTTCCGCTTCG 353
||||||||||| ||| |||| || ||||| || ||||| | |||||||
Sbjct 461 CATGGTCGGCGGTCATTCGGCCGGGGTGAGCAACGAGATGGTGCTGCGCTTCG 513
>seq26
Length=549101
Score = 178 bits (196), Expect = 3e-42
Identities = 236/322 (73%), Gaps = 8/322 (2%)
Strand=Plus/Plus
Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60
||||||||||||||| | || || ||| ||||||| || || ||||||| || | |
Sbjct 186383 CGACCGCCTGCGCCACATCGCCGAACGCACCGAGCTCGGCGAGCGCCGCGAGGCCGTGCT 186442
Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCGTTCTGCGAGGCCGTGGGCAA 120
|| ||||||||||| ||| |||| ||| ||||||||||||||| ||||| | |||||
Sbjct 186443 GGCGGTGACCATTCCGGAGCAGCCGGGCGCGTTCAAGGCGTTCTGCCAGGCCATCGGCAA 186502
Query 121 GCGCCAGATCACCGAATTCAACTACCGTTTCCACTCCGGCAGCGAGGCGCACATCTTTGT 180
|||| | ||||||||||||||||||| | | | | | ||| |||||| | || ||
Sbjct 186503 GCGCAATGTCACCGAATTCAACTACCGCTACAGCGATGCCGGCGCCGCGCACGTGTTCGT 186562
Query 181 CGGCGT---GCAGACCCACCCCGACACCGACCCCCGCAGCGCGCTGATCGCCAGCCTGAC 237
|||||| || | | | ||||| ||| | | ||| | |||| ||| | ||||| |
Sbjct 186563 CGGCGTGTCGCTGCGCGGCGGCGACAGCGAGCGC--CAG-GAGCTGGTCGGCGGCCTG-C 186618
Query 238 CGAGC-AGGGTTTCCCGGTGCTGGACCTGACCGAGAATGAGCTGGCCAAGCTGCACATCC 296
| || |||| | | ||||| |||||| |||| | || ||||||||||||| | |
Sbjct 186619 AGCGCAAGGGCTATGCCGTGCTCGACCTGTCCGACGACGAAATGGCCAAGCTGCATGTGC 186678
Query 297 GCCATATGGTCGGCGGCCATGC 318
| || ||||||||||||| ||
Sbjct 186679 GGCACCTGGTCGGCGGCCACGC 186700
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1025348615808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |