Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01002055.1
Length=294
Score E
Sequences producing significant alignments: (Bits) Value
seq363 154 2e-35
seq7 114 2e-23
seq19269 107 3e-21
>seq363
Length=289854
Score = 154 bits (170), Expect = 2e-35
Identities = 159/207 (77%), Gaps = 1/207 (0%)
Strand=Plus/Plus
Query 88 TGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGT 147
||||||| || | |||||| || | | || ||||||||| |||| || ||||||||||
Sbjct 219147 TGAGCACGGCCAAGAAGGCATCCT-GCGGGATTTCCACGCTGCCGACCTGCTTCATGCGC 219205
Query 148 TTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAG 207
|| || || |||| |||||||| |||||||| ||| || ||||| |||||||||
Sbjct 219206 TTCTTGCCTTCCTTCTGCTTCTCCAGCAGCTTCTTCTTGCGCGACACGTCGCCGCCGTAG 219265
Query 208 CATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCG 267
|| ||||| || |||| ||| | | |||||||||| ||||| ||||||||| |
Sbjct 219266 CACTTGGCGAGCACGTCCTTGCGCATGGCCTTGACGGTCTGACGCGCGATGATCTGCGCA 219325
Query 268 CCAATGGCGGCCTGGATCGCGACGTCG 294
|| || ||||||||||| |||||||||
Sbjct 219326 CCGATCGCGGCCTGGATGGCGACGTCG 219352
>seq7
Length=747525
Score = 114 bits (126), Expect = 2e-23
Identities = 142/193 (74%), Gaps = 1/193 (1%)
Strand=Plus/Plus
Query 95 CGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTAC 154
||| |||||||| |||| | || | ||| ||||| || || ||||||||||||| ||||
Sbjct 632934 CGCCAGGAAGGCCTCTT-GCGGTACTTCAACGTTACCGACCTGCTTCATGCGTTTCTTAC 632992
Query 155 CGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGG 214
| | || ||||| | |||||||| ||| ||||| ||||||||||| || || || |
Sbjct 632993 CTTCTTTCTGCTTTTGCAGCAGCTTTTTCTTCCGGCTGACGTCACCGCCATAACACTTCG 633052
Query 215 CCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGG 274
||| |||||| || | || || |||| ||| || || || | || ||||| |
Sbjct 633053 CCAATACGTTTTTCCGCAGCTGTTTCACGGTGGTGCGGGCGATAACGTGGTTACCAATAG 633112
Query 275 CGGCCTGGATCGC 287
||||||| |||||
Sbjct 633113 CGGCCTGAATCGC 633125
>seq19269
Length=29301
Score = 107 bits (118), Expect = 3e-21
Identities = 145/201 (72%), Gaps = 1/201 (0%)
Strand=Plus/Minus
Query 93 ACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTT 152
|| || | ||| ||||||| |||||||||| || | |||||| | ||||||||||| ||
Sbjct 23419 ACAGCTAAGAACGCTTCTT-GTGGAATTTCAACACTTCCCACTTGTTTCATGCGTTTCTT 23361
Query 153 ACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTT 212
||| | ||||| || ||| || || |||||| |||||||| || || |||||
Sbjct 23360 ACCTTCTTTTTGTTTAGAAAGAAGTTTCTTCTTACGCGAAACGTCACCACCATAACATTT 23301
Query 213 GGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAAT 272
|||| |||||| || | | ||||| || | | || ||||| || ||| | |||||
Sbjct 23300 AGCCAATACGTTTTTACGCATCGCCTTTACAGTAGAACGTGCAATAATTTGCGCACCAAT 23241
Query 273 GGCGGCCTGGATCGCGACGTC 293
|| || || ||||| || ||
Sbjct 23240 AGCAGCTTGAATCGCAACATC 23220
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 840130535892
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |