Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01002055.1 Length=294 Score E Sequences producing significant alignments: (Bits) Value seq363 154 2e-35 seq7 114 2e-23 seq19269 107 3e-21 >seq363 Length=289854 Score = 154 bits (170), Expect = 2e-35 Identities = 159/207 (77%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 88 TGAGCACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGT 147 ||||||| || | |||||| || | | || ||||||||| |||| || |||||||||| Sbjct 219147 TGAGCACGGCCAAGAAGGCATCCT-GCGGGATTTCCACGCTGCCGACCTGCTTCATGCGC 219205 Query 148 TTTTTACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAG 207 || || || |||| |||||||| |||||||| ||| || ||||| ||||||||| Sbjct 219206 TTCTTGCCTTCCTTCTGCTTCTCCAGCAGCTTCTTCTTGCGCGACACGTCGCCGCCGTAG 219265 Query 208 CATTTGGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCG 267 || ||||| || |||| ||| | | |||||||||| ||||| ||||||||| | Sbjct 219266 CACTTGGCGAGCACGTCCTTGCGCATGGCCTTGACGGTCTGACGCGCGATGATCTGCGCA 219325 Query 268 CCAATGGCGGCCTGGATCGCGACGTCG 294 || || ||||||||||| ||||||||| Sbjct 219326 CCGATCGCGGCCTGGATGGCGACGTCG 219352 >seq7 Length=747525 Score = 114 bits (126), Expect = 2e-23 Identities = 142/193 (74%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 95 CGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTTAC 154 ||| |||||||| |||| | || | ||| ||||| || || ||||||||||||| |||| Sbjct 632934 CGCCAGGAAGGCCTCTT-GCGGTACTTCAACGTTACCGACCTGCTTCATGCGTTTCTTAC 632992 Query 155 CGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTTGG 214 | | || ||||| | |||||||| ||| ||||| ||||||||||| || || || | Sbjct 632993 CTTCTTTCTGCTTTTGCAGCAGCTTTTTCTTCCGGCTGACGTCACCGCCATAACACTTCG 633052 Query 215 CCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAATGG 274 ||| |||||| || | || || |||| ||| || || || | || ||||| | Sbjct 633053 CCAATACGTTTTTCCGCAGCTGTTTCACGGTGGTGCGGGCGATAACGTGGTTACCAATAG 633112 Query 275 CGGCCTGGATCGC 287 ||||||| ||||| Sbjct 633113 CGGCCTGAATCGC 633125 >seq19269 Length=29301 Score = 107 bits (118), Expect = 3e-21 Identities = 145/201 (72%), Gaps = 1/201 (0%) Strand=Plus/Minus Query 93 ACCGCAAGGAAGGCTTCTTAGTGGAATTTCCACGTTGCCCACTCGCTTCATGCGTTTTTT 152 || || | ||| ||||||| |||||||||| || | |||||| | ||||||||||| || Sbjct 23419 ACAGCTAAGAACGCTTCTT-GTGGAATTTCAACACTTCCCACTTGTTTCATGCGTTTCTT 23361 Query 153 ACCGGCCTTTTGCTTCTCAAGCAGCTTGCGCTTACGGCTTACGTCACCGCCGTAGCATTT 212 ||| | ||||| || ||| || || |||||| |||||||| || || ||||| Sbjct 23360 ACCTTCTTTTTGTTTAGAAAGAAGTTTCTTCTTACGCGAAACGTCACCACCATAACATTT 23301 Query 213 GGCCAGTACGTTCTTTCTGAGAGCCTTGACGGAGGTCCGCGCAATGATCTGCCCGCCAAT 272 |||| |||||| || | | ||||| || | | || ||||| || ||| | ||||| Sbjct 23300 AGCCAATACGTTTTTACGCATCGCCTTTACAGTAGAACGTGCAATAATTTGCGCACCAAT 23241 Query 273 GGCGGCCTGGATCGCGACGTC 293 || || || ||||| || || Sbjct 23240 AGCAGCTTGAATCGCAACATC 23220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 840130535892