Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01002175.1
Length=414
Score E
Sequences producing significant alignments: (Bits) Value
seq5165 320 4e-85
seq48204 257 4e-66
seq1223 156 1e-35
seq89015 150 4e-34
seq140972 116 9e-24
>seq5165
Length=98167
Score = 320 bits (354), Expect = 4e-85
Identities = 320/412 (78%), Gaps = 16/412 (4%)
Strand=Plus/Minus
Query 4 CTTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63
||||||||||||||||||||||||| || |||||||||||| ||||||||| |||||||
Sbjct 34478 CTTTACAACCCGAAGGCCTTCTTCACTCATGCGGCATGGCTGGATCAGGCTTTCGCCCAT 34419
Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123
||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 34418 TGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTATCTCAGTTCCAGTG 34359
Query 124 TGGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCC 183
|||||| ||||||||||||| |||||| |||| | | || ||| ||| ||||| | ||
Sbjct 34358 TGGCTGATCATCCTCTCAGATCAGCTATAGATCATTGTCTTGGTAAGCCTTTACCTCACC 34299
Query 184 AACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTCCCCCTCTTTG 243
||||| |||||| || | || ||||| |||| | | || | ||| | | |
Sbjct 34298 AACTAACTAATCTAATATAGGCTCATCTAATAGCAATA------AATTTTTCCCCCGTAG 34245
Query 244 GTCTTGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCTCCATCAGGC 303
| ||| ||| ||||||||| ||||||||| |||| || | | |||
Sbjct 34244 G----GCG----TATACGGTATTAGTTGCCGTTTCCAACAATTATTCCGTACTACTAGGT 34193
Query 304 AGTTTCCCAGACATTACTCACCCGTCCGCCACT-CGTCAGCGAAGCAGCAAGCTGCTTCC 362
|| |||| | |||||||||||||||| |||||| || | | ||||||||
Sbjct 34192 AGATTCCTATACATTACTCACCCGTCTGCCACTAAGTTATACCA-TAGCAAGCTAAAATA 34134
Query 363 TGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCTGAG 414
| |||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 34133 TAACTCCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCATTCTGAG 34082
>seq48204
Length=5524
Score = 257 bits (284), Expect = 4e-66
Identities = 315/423 (74%), Gaps = 28/423 (7%)
Strand=Plus/Plus
Query 5 TTTACAACCCGAAGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATT 64
||||||||||||||||| || || |||||||| | |||||||||||||||||||||||
Sbjct 5098 TTTACAACCCGAAGGCCGTCGTCCCTCACGCGGCGTTGCTGCATCAGGCTTGCGCCCATT 5157
Query 65 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGT 124
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 5158 GTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAGTGT 5217
Query 125 GGCTGGTCATCCTCTCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCA 184
||| ||||| |||||||| || |||| ||||||||| |||| ||||||||| | |||
Sbjct 5218 GGCCGGTCACCCTCTCAGGCCGGCTACCCGTCGTCGCCTTGGTGAGCCATTACCTCACCA 5277
Query 185 ACTAGCTAATCCCATCTGGGTTCATCCGATAGTGAGAGGCCCGAAGGTC---CCCCTCTT 241
|| |||| || | | |||||| ||| |||||| || || |
Sbjct 5278 ACAAGCTGATAGGCCGCGAGCTCATCC----CTGA-----CCGAAGTTCTTTCCAACCGA 5328
Query 242 TG-----GTCT--TGCGACGTTATGCGGTATTAGCCACCGTTTCCAGTGGTTATCCCCCT 294
|| | || | | ||| ||||||||| | |||||||| | |||| |||
Sbjct 5329 TGCAGATGCCTGCTCGGCTCGTATCCGGTATTAGACGTCGTTTCCAACGCTTAT--CCCA 5386
Query 295 CCATCA--GGCAG-TTTCCCAGACATTACTCACCCGTCCGCCACTCGTCAGCGAAGCAGC 351
||| ||||| || | || |||||||||||| ||||||| || | || |||
Sbjct 5387 GAGTCAGGGGCAGATTGCTCACGTGTTACTCACCCGTTCGCCACTAATC--CAGAGGAGC 5444
Query 352 AAGCTGCTTCCTGTTACCGTTCGACTTGCATGTGTTAGGCCTGCCGCCAGCGTTCAATCT 411
||||| | || | | |||||||||||||||||||| || ||||||||||||| ||
Sbjct 5445 AAGCTCC--CCCTTCATCGTTCGACTTGCATGTGTTAAGCACGCCGCCAGCGTTCGTCCT 5502
Query 412 GAG 414
|||
Sbjct 5503 GAG 5505
>seq1223
Length=197574
Score = 156 bits (172), Expect = 1e-35
Identities = 139/174 (80%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 21 CTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCAC 80
|||| || | ||||||||||||||| |||| ||| || |||||| ||||||||| |||
Sbjct 273 CTTCATCCTGCACGCGGCATGGCTGGTTCAGACTTCCGTCCATTGACCAATATTCCTCAC 214
Query 81 TGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTC 140
||||||||||||||||||||||| |||||||||||| ||||||||| | || ||||||
Sbjct 213 TGCTGCCTCCCGTAGGAGTCTGGTCCGTGTCTCAGTACCAGTGTGGGGGATCTCCCTCTC 154
Query 141 AGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAAT 194
|| | ||| ||| ||| || ||| ||| ||||| ||||||| |||||
Sbjct 153 AGGACCCCTACCCATCATCGTCTTGGTAAGCCGTTACCTTACCAACTAACTAAT 100
>seq89015
Length=3127
Score = 150 bits (166), Expect = 4e-34
Identities = 108/123 (88%), Gaps = 1/123 (1%)
Strand=Plus/Plus
Query 5 TTTACAACCCGA-AGGCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCAT 63
|||||||||| | ||||| ||||| | ||||||||||||||| ||||||| |||||||
Sbjct 3001 TTTACAACCCAATAGGCCGTCTTCCTGCACGCGGCATGGCTGGGTCAGGCTCTCGCCCAT 3060
Query 64 TGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTG 123
|| |||||||||| ||||||||||||||||||||||||| |||| ||||||| ||||||
Sbjct 3061 TGCCCAATATTCCCTACTGCTGCCTCCCGTAGGAGTCTGGCCCGTATCTCAGTGCCAGTG 3120
Query 124 TGG 126
|||
Sbjct 3121 TGG 3123
Score = 104 bits (114), Expect = 6e-20
Identities = 84/102 (82%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 94 AGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAGACCAGCTAGGG 153
|||||||||| |||| ||||||| ||||||||| | | |||||||||| | ||| |
Sbjct 1 AGGAGTCTGGCCCGTATCTCAGTGCCAGTGTGGGGGACCTTCCTCTCAGAACCCCTACTG 60
Query 154 ATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195
|||||||||| ||||| || |||| |||||||| ||||||||
Sbjct 61 ATCGTCGCCTTGGTGGTCCGTTACACCGCCAACCAGCTAATC 102
>seq140972
Length=1238
Score = 116 bits (128), Expect = 9e-24
Identities = 133/178 (75%), Gaps = 7/178 (4%)
Strand=Plus/Plus
Query 23 TCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCCACTG 82
|| |||| ||||| || ||| |||| |||| |||||||||| ||||||||| |||||
Sbjct 826 TCCTCATTCACGCAATATTACTGGATCAAGCTTTCGCCCATTGTCCAATATTCCTCACTG 885
Query 83 CTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTCTCAG 142
||| | | ||| |||| || | ||||||| |||||||||||| |||| ||||||
Sbjct 886 CTGGC------AAGAGCCTGGGCCTTATCTCAGTCCCAGTGTGGCTGATCATTCTCTCAA 939
Query 143 ACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGC-TAATCCCAT 199
| || ||| ||||| ||| || | | || ||||| ||||||| | |||||| ||
Sbjct 940 ATCAACTAAGGATCATCGGCTTGTTAAGCTTTTACCTTTCCAACTACCTTAATCCTAT 997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1220196795136
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |