Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01002180.1
Length=500
Score E
Sequences producing significant alignments: (Bits) Value
seq48204 378 2e-102
seq5165 376 7e-102
seq1223 232 2e-58
seq89015 201 3e-49
seq140972 174 5e-41
>seq48204
Length=5524
Score = 378 bits (418), Expect = 2e-102
Identities = 286/336 (85%), Gaps = 6/336 (2%)
Strand=Plus/Minus
Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219
|||| | || |||| |||||| |||||| |||| ||||||||||||| ||||||| |
Sbjct 5295 CGCGGCCTATCAGCTTGTTGGTGAGGTAATGGCTCACCAAGGCGACGACGGGTAGCCGGC 5236
Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279
|||||||||||| |||||||| ||| |||||||||||| ||| |||||||||||||||||
Sbjct 5235 CTGAGAGGGTGACCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 5176
Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339
||||||||||||||||||||||||| ||||||||||||||||||||||||||| || ||
Sbjct 5175 CAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCAACGCCGCGTGAGGGACGA 5116
Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAA-----GATAATGACGGTACTTGAGG 394
||||||||||| ||||| |||| | || |||| || | ||||||||| || |
Sbjct 5115 CGGCCTTCGGGTTGTAAACCTCTTTTAGCAGGGAAGAAGCGAGAGTGACGGTACCTGCAG 5056
Query 395 AGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTAT 454
| |||| |||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 5055 AAAAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAT 4996
Query 455 CCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGT 490
||||||||| | |||||||||| | |||||| |||
Sbjct 4995 CCGGAATTA-TTGGGCGTAAAGAGCTCGTAGGCGGT 4961
>seq5165
Length=98167
Score = 376 bits (416), Expect = 7e-102
Identities = 284/333 (85%), Gaps = 1/333 (0%)
Strand=Plus/Plus
Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226
|||||| |||||||| |||||| ||||||||||| | | |||| |||| || |||||||
Sbjct 34287 GATTAGTTAGTTGGTGAGGTAAAGGCTTACCAAGACAATGATCTATAGCTGATCTGAGAG 34346
Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286
| ||||| |||||| ||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 34347 GATGATCAGCCACACTGGAACTGAGATACGGTCCAGACTCCTACGGGAGGCAGCAGTGGG 34406
Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346
|||||||| ||||||||| |||||||||| |||| | ||||| |||| || |||||||||
Sbjct 34407 GAATATTGGACAATGGGCGAAAGCCTGATCCAGCCATGCCGCATGAGTGAAGAAGGCCTT 34466
Query 347 CGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGG 406
||||| |||||||||| | |||||||||||||||||||| || |||| || ||
Sbjct 34467 CGGGTTGTAAAGCTCTTTTAGTGAGGAAGATAATGACGGTACTCACAGAAGAAGTCCTGG 34526
Query 407 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTG 466
|||||| |||||||||||||||||||||||| || ||||||||||||| |||||| | |
Sbjct 34527 CTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTTATTCGGAATCA-TT 34585
Query 467 GGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499
|||||||||||| ||||||| || || |||||
Sbjct 34586 GGGCGTAAAGGGCGCGTAGGCGGGTTAGTAAGT 34618
>seq1223
Length=197574
Score = 232 bits (256), Expect = 2e-58
Identities = 266/360 (74%), Gaps = 21/360 (6%)
Strand=Plus/Plus
Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220
||||| ||||| ||||||||||||||||||||||||||| ||| ||| |||| | ||
Sbjct 93 GCGTCCCATTAGTTAGTTGGTAAGGTAACGGCTTACCAAGACGATGATGGGTAGGGGTCC 152
Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280
|||||||| |||| ||||| ||| |||||||||||| ||| ||||||||||||||||||
Sbjct 153 TGAGAGGGAGATCCCCCACACTGGTACTGAGACACGGACCAGACTCCTACGGGAGGCAGC 212
Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAA 340
|||| ||||||||| |||||| | ||| |||| |||| | |||||||| ||||||
Sbjct 213 AGTGAGGAATATTGGTCAATGGACGGAAGTCTGAACCAGCCATGCCGCGTGCAGGATGAA 272
Query 341 G-GCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA-------------------TAAT 380
| || || ||||| || | | |||||| || |
Sbjct 273 GCATCTATGGTGTGTAAACTGCTTTTGTACGGGAAGAAAAAAAGCTACGTGTAGCTTACT 332
Query 381 GACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAG 440
|||||||| | || ||| ||||||||| |||||||||||||||||||||||| ||
Sbjct 333 GACGGTACCGTAAGAATAAGGATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAG 392
Query 441 GGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
| | ||||||||||||||| | | ||| |||||||| |||||| || | ||||||
Sbjct 393 GATCCAAGCGTTATCCGGAATCA-TTGGGTTTAAAGGGTCCGTAGGCGGCCTTATAAGTC 451
>seq89015
Length=3127
Score = 201 bits (222), Expect = 3e-49
Identities = 214/284 (75%), Gaps = 20/284 (7%)
Strand=Plus/Minus
Query 236 CCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGC 295
||||| ||| ||||||| |||| ||| ||||||||||||||||||||| ||||||||||
Sbjct 3123 CCACACTGGCACTGAGATACGGGCCAGACTCCTACGGGAGGCAGCAGTAGGGAATATTGG 3064
Query 296 ACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCT-TCGGGTCGT 354
|||||||| | ||||||| |||| | |||||||| || || ||||| | |||| ||
Sbjct 3063 GCAATGGGCGAGAGCCTGACCCAGCCATGCCGCGTGCAGGAAGACGGCCTATTGGGTTGT 3004
Query 355 AAAGCTCTGTCCTCAAGGAAGATAA------------------TGACGGTACTTGAGGAG 396
||| || | || |||||| || || |||||| || ||
Sbjct 3003 AAACTGCTTTTATCTGGGAAGAAAAGGCCCGTGCGCGGGACATTGCCGGTACCAGATGAA 2944
Query 397 GAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCC 456
|||| |||||||||| |||||||||||||||||||||||| |||| || |||||| |||
Sbjct 2943 TAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTGTCC 2884
Query 457 GGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500
||| ||| | ||| ||||||||||||||| || | |||||||
Sbjct 2883 GGATTTA-TTGGGTTTAAAGGGTGCGTAGGCGGCTGTTTAAGTC 2841
Score = 100 bits (110), Expect = 9e-19
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 144 CGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCG 203
||||| |||| | | |||||||||||||| ||||| ||||||| |||||||||
Sbjct 125 CGGTATGGGATGGGCATGCGTCTGATTAGCTGGTTGGCGGTGTAACGGACCACCAAGGCG 66
Query 204 ACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAA 263
||||||||||| | |||||||| | || ||||| ||| ||||||| |||| ||| |
Sbjct 65 ACGATCAGTAGGGGTTCTGAGAGGAAGGTCCCCCACACTGGCACTGAGATACGGGCCAGA 6
Query 264 CTCCT 268
|||||
Sbjct 5 CTCCT 1
>seq140972
Length=1238
Score = 174 bits (192), Expect = 5e-41
Identities = 244/345 (71%), Gaps = 33/345 (10%)
Strand=Plus/Minus
Query 167 GATTA-GCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGA 225
||||| | ||||||| ||||||| ||||| |||| ||| |||| ||| || |||||
Sbjct 993 GATTAAGGTAGTTGGAAAGGTAAAAGCTTAACAAGCCGATGATCCTTAGTTGATTTGAGA 934
Query 226 GGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGG 285
| ||||| |||||| ||| ||||||| | || ||| ||| | | ||||||||
Sbjct 933 GAATGATCAGCCACACTGGGACTGAGATAAGGCCCAGGCTCTTGC------CAGCAGTGA 880
Query 286 GGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC- 344
||||||||| ||||||||| ||||| |||| ||| || |||||| || || ||
Sbjct 879 GGAATATTGGACAATGGGCGAAAGCTTGATCCAGTAATATTGCGTGAATGAGGACAGCGA 820
Query 345 ------TTCG------------------GGTCGTAAAGCTCTGTCCTCAAGGAAGATAAT 380
|| | ||| |||||| ||| || | | |||||||||
Sbjct 819 AAAAGATTTGAGAGTAAAATCTTAAATTGGTTGTAAAGTTCTTTCGTTAGTGAAGATAAT 760
Query 381 GACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAG 440
||| || | | || ||| ||||||||||| |||||||||||||||||||||||| ||
Sbjct 759 GACTTTAGCTAAAGAAGAAACCCCGGCTAACCTCGTGCCAGCAGCCGCGGTAATACGAAG 700
Query 441 GGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAG 485
|||| ||| |||||| ||| | | ||||||||||||| |||||
Sbjct 699 GGGGTGAGCATTATCCAAAATGA-TTGGGCGTAAAGGGTTCGTAG 656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1494900785664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |