Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq48204 378 2e-102 seq5165 376 7e-102 seq1223 232 2e-58 seq89015 201 3e-49 seq140972 174 5e-41 >seq48204 Length=5524 Score = 378 bits (418), Expect = 2e-102 Identities = 286/336 (85%), Gaps = 6/336 (2%) Strand=Plus/Minus Query 160 CGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGAC 219 |||| | || |||| |||||| |||||| |||| ||||||||||||| ||||||| | Sbjct 5295 CGCGGCCTATCAGCTTGTTGGTGAGGTAATGGCTCACCAAGGCGACGACGGGTAGCCGGC 5236 Query 220 CTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAG 279 |||||||||||| |||||||| ||| |||||||||||| ||| ||||||||||||||||| Sbjct 5235 CTGAGAGGGTGACCGGCCACACTGGGACTGAGACACGGCCCAGACTCCTACGGGAGGCAG 5176 Query 280 CAGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGA 339 ||||||||||||||||||||||||| ||||||||||||||||||||||||||| || || Sbjct 5175 CAGTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCAACGCCGCGTGAGGGACGA 5116 Query 340 AGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAA-----GATAATGACGGTACTTGAGG 394 ||||||||||| ||||| |||| | || |||| || | ||||||||| || | Sbjct 5115 CGGCCTTCGGGTTGTAAACCTCTTTTAGCAGGGAAGAAGCGAGAGTGACGGTACCTGCAG 5056 Query 395 AGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTAT 454 | |||| |||||||||||||||||||||||||||||||||||||||| || |||||||| Sbjct 5055 AAAAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTAT 4996 Query 455 CCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGT 490 ||||||||| | |||||||||| | |||||| ||| Sbjct 4995 CCGGAATTA-TTGGGCGTAAAGAGCTCGTAGGCGGT 4961 >seq5165 Length=98167 Score = 376 bits (416), Expect = 7e-102 Identities = 284/333 (85%), Gaps = 1/333 (0%) Strand=Plus/Plus Query 167 GATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAG 226 |||||| |||||||| |||||| ||||||||||| | | |||| |||| || ||||||| Sbjct 34287 GATTAGTTAGTTGGTGAGGTAAAGGCTTACCAAGACAATGATCTATAGCTGATCTGAGAG 34346 Query 227 GGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGG 286 | ||||| |||||| ||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 34347 GATGATCAGCCACACTGGAACTGAGATACGGTCCAGACTCCTACGGGAGGCAGCAGTGGG 34406 Query 287 GAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTT 346 |||||||| ||||||||| |||||||||| |||| | ||||| |||| || ||||||||| Sbjct 34407 GAATATTGGACAATGGGCGAAAGCCTGATCCAGCCATGCCGCATGAGTGAAGAAGGCCTT 34466 Query 347 CGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGG 406 ||||| |||||||||| | |||||||||||||||||||| || |||| || || Sbjct 34467 CGGGTTGTAAAGCTCTTTTAGTGAGGAAGATAATGACGGTACTCACAGAAGAAGTCCTGG 34526 Query 407 CTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTACTG 466 |||||| |||||||||||||||||||||||| || ||||||||||||| |||||| | | Sbjct 34527 CTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTTATTCGGAATCA-TT 34585 Query 467 GGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGT 499 |||||||||||| ||||||| || || ||||| Sbjct 34586 GGGCGTAAAGGGCGCGTAGGCGGGTTAGTAAGT 34618 >seq1223 Length=197574 Score = 232 bits (256), Expect = 2e-58 Identities = 266/360 (74%), Gaps = 21/360 (6%) Strand=Plus/Plus Query 161 GCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACC 220 ||||| ||||| ||||||||||||||||||||||||||| ||| ||| |||| | || Sbjct 93 GCGTCCCATTAGTTAGTTGGTAAGGTAACGGCTTACCAAGACGATGATGGGTAGGGGTCC 152 Query 221 TGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGC 280 |||||||| |||| ||||| ||| |||||||||||| ||| |||||||||||||||||| Sbjct 153 TGAGAGGGAGATCCCCCACACTGGTACTGAGACACGGACCAGACTCCTACGGGAGGCAGC 212 Query 281 AGTGGGGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAA 340 |||| ||||||||| |||||| | ||| |||| |||| | |||||||| |||||| Sbjct 213 AGTGAGGAATATTGGTCAATGGACGGAAGTCTGAACCAGCCATGCCGCGTGCAGGATGAA 272 Query 341 G-GCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGA-------------------TAAT 380 | || || ||||| || | | |||||| || | Sbjct 273 GCATCTATGGTGTGTAAACTGCTTTTGTACGGGAAGAAAAAAAGCTACGTGTAGCTTACT 332 Query 381 GACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAG 440 |||||||| | || ||| ||||||||| |||||||||||||||||||||||| || Sbjct 333 GACGGTACCGTAAGAATAAGGATCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAG 392 Query 441 GGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 | | ||||||||||||||| | | ||| |||||||| |||||| || | |||||| Sbjct 393 GATCCAAGCGTTATCCGGAATCA-TTGGGTTTAAAGGGTCCGTAGGCGGCCTTATAAGTC 451 >seq89015 Length=3127 Score = 201 bits (222), Expect = 3e-49 Identities = 214/284 (75%), Gaps = 20/284 (7%) Strand=Plus/Minus Query 236 CCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGGAATATTGC 295 ||||| ||| ||||||| |||| ||| ||||||||||||||||||||| |||||||||| Sbjct 3123 CCACACTGGCACTGAGATACGGGCCAGACTCCTACGGGAGGCAGCAGTAGGGAATATTGG 3064 Query 296 ACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCT-TCGGGTCGT 354 |||||||| | ||||||| |||| | |||||||| || || ||||| | |||| || Sbjct 3063 GCAATGGGCGAGAGCCTGACCCAGCCATGCCGCGTGCAGGAAGACGGCCTATTGGGTTGT 3004 Query 355 AAAGCTCTGTCCTCAAGGAAGATAA------------------TGACGGTACTTGAGGAG 396 ||| || | || |||||| || || |||||| || || Sbjct 3003 AAACTGCTTTTATCTGGGAAGAAAAGGCCCGTGCGCGGGACATTGCCGGTACCAGATGAA 2944 Query 397 GAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCC 456 |||| |||||||||| |||||||||||||||||||||||| |||| || |||||| ||| Sbjct 2943 TAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTGTCC 2884 Query 457 GGAATTACTGGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTC 500 ||| ||| | ||| ||||||||||||||| || | ||||||| Sbjct 2883 GGATTTA-TTGGGTTTAAAGGGTGCGTAGGCGGCTGTTTAAGTC 2841 Score = 100 bits (110), Expect = 9e-19 Identities = 97/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 144 CGGTACAGGATAGACCCGCGTCTGATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCG 203 ||||| |||| | | |||||||||||||| ||||| ||||||| ||||||||| Sbjct 125 CGGTATGGGATGGGCATGCGTCTGATTAGCTGGTTGGCGGTGTAACGGACCACCAAGGCG 66 Query 204 ACGATCAGTAGCCGACCTGAGAGGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAA 263 ||||||||||| | |||||||| | || ||||| ||| ||||||| |||| ||| | Sbjct 65 ACGATCAGTAGGGGTTCTGAGAGGAAGGTCCCCCACACTGGCACTGAGATACGGGCCAGA 6 Query 264 CTCCT 268 ||||| Sbjct 5 CTCCT 1 >seq140972 Length=1238 Score = 174 bits (192), Expect = 5e-41 Identities = 244/345 (71%), Gaps = 33/345 (10%) Strand=Plus/Minus Query 167 GATTA-GCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGA 225 ||||| | ||||||| ||||||| ||||| |||| ||| |||| ||| || ||||| Sbjct 993 GATTAAGGTAGTTGGAAAGGTAAAAGCTTAACAAGCCGATGATCCTTAGTTGATTTGAGA 934 Query 226 GGGTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGG 285 | ||||| |||||| ||| ||||||| | || ||| ||| | | |||||||| Sbjct 933 GAATGATCAGCCACACTGGGACTGAGATAAGGCCCAGGCTCTTGC------CAGCAGTGA 880 Query 286 GGAATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCC- 344 ||||||||| ||||||||| ||||| |||| ||| || |||||| || || || Sbjct 879 GGAATATTGGACAATGGGCGAAAGCTTGATCCAGTAATATTGCGTGAATGAGGACAGCGA 820 Query 345 ------TTCG------------------GGTCGTAAAGCTCTGTCCTCAAGGAAGATAAT 380 || | ||| |||||| ||| || | | ||||||||| Sbjct 819 AAAAGATTTGAGAGTAAAATCTTAAATTGGTTGTAAAGTTCTTTCGTTAGTGAAGATAAT 760 Query 381 GACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAG 440 ||| || | | || ||| ||||||||||| |||||||||||||||||||||||| || Sbjct 759 GACTTTAGCTAAAGAAGAAACCCCGGCTAACCTCGTGCCAGCAGCCGCGGTAATACGAAG 700 Query 441 GGGGCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAG 485 |||| ||| |||||| ||| | | ||||||||||||| ||||| Sbjct 699 GGGGTGAGCATTATCCAAAATGA-TTGGGCGTAAAGGGTTCGTAG 656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1494900785664