Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq5165 356 6e-96 seq48204 354 2e-95 seq89015 340 4e-91 seq1223 297 5e-78 seq21163 178 3e-42 seq140972 172 1e-40 seq4656 73.4 9e-11 >seq5165 Length=98167 Score = 356 bits (394), Expect = 6e-96 Identities = 280/333 (84%), Gaps = 4/333 (1%) Strand=Plus/Plus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || |||| || |||||||| |||||||||||||||||||||||| || |||||||||||| Sbjct 34514 GAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTTA 34573 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 | |||||| | ||||||||||||| ||||||| || || ||||| | | |||||| | Sbjct 34574 TTCGGAATCATTGGGCGTAAAGGGCGCGTAGGCGGGTTAGTAAGTTAAAAGTGAAATCCC 34633 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAG--TGCAGGAGGGGCAAG 186 | ||||||||| || ||||||||| ||||||| | |||||| || | || || || Sbjct 34634 AAGGCTCAACCTTGGAACTGCTTTTAAAACTGCTAGTCTAGAGATTGAA--AGAGGATAG 34691 Query 187 TGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG 246 |||||||||||||||| |||||||| |||| |||||||||||||||||||||||||||| Sbjct 34692 AGGAATTCCTAGTGTAGAGGTGAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGG 34751 Query 247 CGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAG 306 || || |||| | ||||| ||||||| |||| ||||||||||||||||||||||| Sbjct 34752 CGTCTATCTGGTTCAAATCTGACGCTGAGGCGCGAAGGCGTGGGGAGCAAACAGGATTAG 34811 Query 307 ATACCCTGGTAGTCCACGCCGTAAACGATGAAT 339 ||||||||||||||||||| ||||||||||||| Sbjct 34812 ATACCCTGGTAGTCCACGCTGTAAACGATGAAT 34844 >seq48204 Length=5524 Score = 354 bits (392), Expect = 2e-95 Identities = 320/399 (80%), Gaps = 5/399 (1%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 5052 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTATCCG 4993 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 |||||| ||||||||||| | |||||| ||| | | ||| | |||||| | || Sbjct 4992 GAATTATTGGGCGTAAAGAGCTCGTAGGCGGTCTGTCGCGTCTGCTGTGAAAACCCGAGG 4933 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 ||||||| |||| ||| | | || | | ||||||||| | ||||| | |||||| Sbjct 4932 CTCAACCTCGGGCTTGCAGTGGGTACGGGCAGACTAGAGTGCGGTAGGGGAGATTGGAAT 4873 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 |||| ||||||||||| |||||| |||||| |||||||||||| |||||||||| | | Sbjct 4872 TCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCGATGGCGAAGGCAGATC 4813 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 |||| | ||||||||| |||||| |||||| |||||||||||||||| |||||||||| Sbjct 4812 TCTGGGCCGTAACTGACGCTGAGGAGCGAAAGGGTGGGGAGCAAACAGGCTTAGATACCC 4753 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT---AAGTGCTCCGG 369 ||||||||||||||||||||| || ||||| ||| |||| ||| | | |||| | Sbjct 4752 TGGTAGTCCACGCCGTAAACGTTGGGAACTAGATGT-GGGGACCATTCCACGGTCTCC-G 4695 Query 370 TGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 || || ||| |||||| ||||| || ||||||||||| Sbjct 4694 TGTCGTAGCTAACGCATTAAGTTCCCCGCCTGGGGAGTA 4656 >seq89015 Length=3127 Score = 340 bits (376), Expect = 4e-91 Identities = 314/396 (79%), Gaps = 4/396 (1%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 |||| |||||||||| |||||||||||||||||||||||| |||| || |||||| |||| Sbjct 2942 AAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTGTCCG 2883 Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132 || ||| |||| ||||||||||||||| || | ||||||||| |||||||| | || Sbjct 2882 GATTTATTGGGTTTAAAGGGTGCGTAGGCGGCTGTTTAAGTCAGCGGTGAAAGACATCGG 2823 Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192 ||||||| | | ||| |||| |||| | |||| ||||| ||||||| | |||||| Sbjct 2822 CTCAACCGATGCAGTGCCGTTGATACTGGATGGCTTGAGTGTTGGAGGGGTACATGGAAT 2763 Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252 | | ||||||||||||||||| |||||| | ||||||||| | |||||||| | Sbjct 2762 TGATGGTGTAGCGGTGAAATGCATAGATACCATCAGGAACACCGATAGCGAAGGCATTGT 2703 Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312 |||| | ||||||| ||||||| ||||||| |||||||| ||||||||||||||||| Sbjct 2702 ACTGGCCAACAACTGACGCTGAGGCACGAAAGCATGGGGAGCGAACAGGATTAGATACCC 2643 Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGC 372 |||||||||| |||||||||||||| |||| | ||| | || ||| ||| ||| Sbjct 2642 TGGTAGTCCATGCCGTAAACGATGATTACTCGCTGTTATGCCG-ATAGGTGTAGCGG--- 2587 Query 373 CGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | ||| || || |||||| ||||||||||||||| Sbjct 2586 CCAAGCGAAAGCGTTAAGTAATCCACCTGGGGAGTA 2551 >seq1223 Length=197574 Score = 297 bits (328), Expect = 5e-78 Identities = 303/391 (77%), Gaps = 6/391 (2%) Strand=Plus/Plus Query 19 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 78 ||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||| | Sbjct 356 CGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATCCAAGCGTTATCCGGAATCA 415 Query 79 CTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAAC 138 |||| |||||||| |||||| || | |||||||| |||||||| | ||||| ||| Sbjct 416 TTGGGTTTAAAGGGTCCGTAGGCGGCCTTATAAGTCAGCGGTGAAAGTTTTTGGCTTAAC 475 Query 139 CCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAG 198 | | ||| |||| |||| |||||| || | | | | || | |||| ||| Sbjct 476 CAAAAAATTGCCATTGATACTGTAGGGCTTGAATTATTGTGAAGTAACTAGAATATGTAG 535 Query 199 TGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCT-GG 257 |||||||||||||||| ||||||||| |||| |||| | |||||||| | || || Sbjct 536 TGTAGCGGTGAAATGCTTAGATATTACATGGAATACCAATTGCGAAGGCAGGTTACTAAC 595 Query 258 ACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTA 317 | || | |||| |||| | |||||||||||| ||| |||||||||||||||||||||| Sbjct 596 AATG-GATTGACGCTGATGGACGAAAGCGTGGGTAGCGAACAGGATTAGATACCCTGGTA 654 Query 318 GTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGCCGCAG 377 ||||||||||||||||||| ||||||| ||| ||||| ||| ||| ||| | || Sbjct 655 GTCCACGCCGTAAACGATGGATACTAGCTGTTTGGGCG--TAA--GCTTGAGTGGCTAAG 710 Query 378 CAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | || | |||||||| |||||||||||||| Sbjct 711 CGAAAGTGATAAGTATCCCACCTGGGGAGTA 741 >seq21163 Length=23524 Score = 178 bits (196), Expect = 3e-42 Identities = 196/257 (76%), Gaps = 8/257 (3%) Strand=Plus/Plus Query 56 GGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCA 115 || || ||||||||||||| ||| |||| |||||||| |||||| || | ||||||| Sbjct 4719 GGTGCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTCCGTAGGCGGATCTGTAAGTCA 4778 Query 116 GAGGTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGT--- 172 | ||||||| | |||| |||| ||||| |||| |||||||| || |||| Sbjct 4779 GTGGTGAAATCTTTCGGCTTAACCGGAAAACTGCCATTGATACTGCAGGTCTTGAGTAAG 4838 Query 173 GCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAAC 232 | || || ||| |||||| ||||||||||||||||||| ||||||||| |||| Sbjct 4839 GTAGAAGTGGC---TGGAATAAGTAGTGTAGCGGTGAAATGCATAGATATTACTTAGAAC 4895 Query 233 ACCAGTGGCGAAGGCGGCTTGCT-GGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGG 291 |||| | |||||||| | | || | || |||||||| |||| | ||||||||||||| Sbjct 4896 ACCAATTGCGAAGGCAGGTCACTATGTCT-TAACTGACGCTGATGGACGAAAGCGTGGGG 4954 Query 292 AGCAAACAGGATTAGAT 308 ||| ||||||||||||| Sbjct 4955 AGCGAACAGGATTAGAT 4971 >seq140972 Length=1238 Score = 172 bits (190), Expect = 1e-40 Identities = 243/337 (72%), Gaps = 6/337 (2%) Strand=Plus/Minus Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68 || ||| ||||||||||| |||||||||||||||||||||||| |||||| ||| ||| Sbjct 746 GAAGAAACCCCGGCTAACCTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGTGAGCATTA 687 Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128 ||| ||| | |||||||||||||| ||||| | | | ||| | ||||||| | Sbjct 686 TCCAAAATGATTGGGCGTAAAGGGTTCGTAGATTGCAAATGTTTTCATATGTGAAAGTTT 627 Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTG 188 | | || | ||| | ||| ||| | ||| |||| | | | | | Sbjct 626 AA---TTAAAATTAAAAATGCGTATGATACTCCTTTGCTTGAGTATATTATGAGATAACA 570 Query 189 GAATTCC-TAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGC 247 ||||| ||| | || ||||||| | ||||| | | ||||| ||||||||| | || Sbjct 569 GAATTTTATAGGG-AGGAGTGAAATCCATAGATCTATGAAGGAATGCCAGTGGCGGAAGC 511 Query 248 GGCTTGCTGGACTGTA-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAG 306 || | || || | | ||||||| ||||| ||||||| |||||||||||||||||||| Sbjct 510 GGTTATCTAGAATATTTACTGACATTGAGGAACGAAAGCATGGGGAGCAAACAGGATTAG 451 Query 307 ATACCCTGGTAGTCCACGCCGTAAACGATGAATACTA 343 |||||||||||||||| || || || |||||| ||| Sbjct 450 ATACCCTGGTAGTCCATGCTGTCAATTATGAATGCTA 414 >seq4656 Length=104629 Score = 73.4 bits (80), Expect = 9e-11 Identities = 48/53 (91%), Gaps = 0/53 (0%) Strand=Plus/Minus Query 296 AACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGT 348 ||||||||||||||||||||||||||||||| |||||||||| ||| | ||| Sbjct 92243 AACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGATGACTCGATGT 92191 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1201031400448