Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01002183.1
Length=408
Score E
Sequences producing significant alignments: (Bits) Value
seq5165 356 6e-96
seq48204 354 2e-95
seq89015 340 4e-91
seq1223 297 5e-78
seq21163 178 3e-42
seq140972 172 1e-40
seq4656 73.4 9e-11
>seq5165
Length=98167
Score = 356 bits (394), Expect = 6e-96
Identities = 280/333 (84%), Gaps = 4/333 (1%)
Strand=Plus/Plus
Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68
|| |||| || |||||||| |||||||||||||||||||||||| || ||||||||||||
Sbjct 34514 GAAGAAGTCCTGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGAGGGCTAGCGTTA 34573
Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128
| |||||| | ||||||||||||| ||||||| || || ||||| | | |||||| |
Sbjct 34574 TTCGGAATCATTGGGCGTAAAGGGCGCGTAGGCGGGTTAGTAAGTTAAAAGTGAAATCCC 34633
Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAG--TGCAGGAGGGGCAAG 186
| ||||||||| || ||||||||| ||||||| | |||||| || | || || ||
Sbjct 34634 AAGGCTCAACCTTGGAACTGCTTTTAAAACTGCTAGTCTAGAGATTGAA--AGAGGATAG 34691
Query 187 TGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGG 246
|||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||
Sbjct 34692 AGGAATTCCTAGTGTAGAGGTGAAATTCGTAAATATTAGGAGGAACACCAGTGGCGAAGG 34751
Query 247 CGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAG 306
|| || |||| | ||||| ||||||| |||| |||||||||||||||||||||||
Sbjct 34752 CGTCTATCTGGTTCAAATCTGACGCTGAGGCGCGAAGGCGTGGGGAGCAAACAGGATTAG 34811
Query 307 ATACCCTGGTAGTCCACGCCGTAAACGATGAAT 339
||||||||||||||||||| |||||||||||||
Sbjct 34812 ATACCCTGGTAGTCCACGCTGTAAACGATGAAT 34844
>seq48204
Length=5524
Score = 354 bits (392), Expect = 2e-95
Identities = 320/399 (80%), Gaps = 5/399 (1%)
Strand=Plus/Minus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| |||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 5052 AAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCGAGCGTTATCCG 4993
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|||||| ||||||||||| | |||||| ||| | | ||| | |||||| | ||
Sbjct 4992 GAATTATTGGGCGTAAAGAGCTCGTAGGCGGTCTGTCGCGTCTGCTGTGAAAACCCGAGG 4933
Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192
||||||| |||| ||| | | || | | ||||||||| | ||||| | ||||||
Sbjct 4932 CTCAACCTCGGGCTTGCAGTGGGTACGGGCAGACTAGAGTGCGGTAGGGGAGATTGGAAT 4873
Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252
|||| ||||||||||| |||||| |||||| |||||||||||| |||||||||| | |
Sbjct 4872 TCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCGATGGCGAAGGCAGATC 4813
Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312
|||| | ||||||||| |||||| |||||| |||||||||||||||| ||||||||||
Sbjct 4812 TCTGGGCCGTAACTGACGCTGAGGAGCGAAAGGGTGGGGAGCAAACAGGCTTAGATACCC 4753
Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCAT---AAGTGCTCCGG 369
||||||||||||||||||||| || ||||| ||| |||| ||| | | |||| |
Sbjct 4752 TGGTAGTCCACGCCGTAAACGTTGGGAACTAGATGT-GGGGACCATTCCACGGTCTCC-G 4695
Query 370 TGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
|| || ||| |||||| ||||| || |||||||||||
Sbjct 4694 TGTCGTAGCTAACGCATTAAGTTCCCCGCCTGGGGAGTA 4656
>seq89015
Length=3127
Score = 340 bits (376), Expect = 4e-91
Identities = 314/396 (79%), Gaps = 4/396 (1%)
Strand=Plus/Minus
Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72
|||| |||||||||| |||||||||||||||||||||||| |||| || |||||| ||||
Sbjct 2942 AAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTGTCCG 2883
Query 73 GAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGG 132
|| ||| |||| ||||||||||||||| || | ||||||||| |||||||| | ||
Sbjct 2882 GATTTATTGGGTTTAAAGGGTGCGTAGGCGGCTGTTTAAGTCAGCGGTGAAAGACATCGG 2823
Query 133 CTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAAT 192
||||||| | | ||| |||| |||| | |||| ||||| ||||||| | ||||||
Sbjct 2822 CTCAACCGATGCAGTGCCGTTGATACTGGATGGCTTGAGTGTTGGAGGGGTACATGGAAT 2763
Query 193 TCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTT 252
| | ||||||||||||||||| |||||| | ||||||||| | |||||||| |
Sbjct 2762 TGATGGTGTAGCGGTGAAATGCATAGATACCATCAGGAACACCGATAGCGAAGGCATTGT 2703
Query 253 GCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCC 312
|||| | ||||||| ||||||| ||||||| |||||||| |||||||||||||||||
Sbjct 2702 ACTGGCCAACAACTGACGCTGAGGCACGAAAGCATGGGGAGCGAACAGGATTAGATACCC 2643
Query 313 TGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGC 372
|||||||||| |||||||||||||| |||| | ||| | || ||| ||| |||
Sbjct 2642 TGGTAGTCCATGCCGTAAACGATGATTACTCGCTGTTATGCCG-ATAGGTGTAGCGG--- 2587
Query 373 CGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| ||| || || |||||| |||||||||||||||
Sbjct 2586 CCAAGCGAAAGCGTTAAGTAATCCACCTGGGGAGTA 2551
>seq1223
Length=197574
Score = 297 bits (328), Expect = 5e-78
Identities = 303/391 (77%), Gaps = 6/391 (2%)
Strand=Plus/Plus
Query 19 CGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCGGAATTA 78
||||||||| |||||||||||||||||||||||| ||| | ||||||||||||||| |
Sbjct 356 CGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGATCCAAGCGTTATCCGGAATCA 415
Query 79 CTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATGGCTCAAC 138
|||| |||||||| |||||| || | |||||||| |||||||| | ||||| |||
Sbjct 416 TTGGGTTTAAAGGGTCCGTAGGCGGCCTTATAAGTCAGCGGTGAAAGTTTTTGGCTTAAC 475
Query 139 CCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAATTCCTAG 198
| | ||| |||| |||| |||||| || | | | | || | |||| |||
Sbjct 476 CAAAAAATTGCCATTGATACTGTAGGGCTTGAATTATTGTGAAGTAACTAGAATATGTAG 535
Query 199 TGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGCGGCTTGCT-GG 257
|||||||||||||||| ||||||||| |||| |||| | |||||||| | || ||
Sbjct 536 TGTAGCGGTGAAATGCTTAGATATTACATGGAATACCAATTGCGAAGGCAGGTTACTAAC 595
Query 258 ACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCTGGTA 317
| || | |||| |||| | |||||||||||| ||| ||||||||||||||||||||||
Sbjct 596 AATG-GATTGACGCTGATGGACGAAAGCGTGGGTAGCGAACAGGATTAGATACCCTGGTA 654
Query 318 GTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATAAGTGCTCCGGTGCCGCAG 377
||||||||||||||||||| ||||||| ||| ||||| ||| ||| ||| | ||
Sbjct 655 GTCCACGCCGTAAACGATGGATACTAGCTGTTTGGGCG--TAA--GCTTGAGTGGCTAAG 710
Query 378 CAAACGCAATAAGTATTCCACCTGGGGAGTA 408
| || | |||||||| ||||||||||||||
Sbjct 711 CGAAAGTGATAAGTATCCCACCTGGGGAGTA 741
>seq21163
Length=23524
Score = 178 bits (196), Expect = 3e-42
Identities = 196/257 (76%), Gaps = 8/257 (3%)
Strand=Plus/Plus
Query 56 GGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCA 115
|| || ||||||||||||| ||| |||| |||||||| |||||| || | |||||||
Sbjct 4719 GGTGCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTCCGTAGGCGGATCTGTAAGTCA 4778
Query 116 GAGGTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGT--- 172
| ||||||| | |||| |||| ||||| |||| |||||||| || ||||
Sbjct 4779 GTGGTGAAATCTTTCGGCTTAACCGGAAAACTGCCATTGATACTGCAGGTCTTGAGTAAG 4838
Query 173 GCAGGAGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAAC 232
| || || ||| |||||| ||||||||||||||||||| ||||||||| ||||
Sbjct 4839 GTAGAAGTGGC---TGGAATAAGTAGTGTAGCGGTGAAATGCATAGATATTACTTAGAAC 4895
Query 233 ACCAGTGGCGAAGGCGGCTTGCT-GGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGG 291
|||| | |||||||| | | || | || |||||||| |||| | |||||||||||||
Sbjct 4896 ACCAATTGCGAAGGCAGGTCACTATGTCT-TAACTGACGCTGATGGACGAAAGCGTGGGG 4954
Query 292 AGCAAACAGGATTAGAT 308
||| |||||||||||||
Sbjct 4955 AGCGAACAGGATTAGAT 4971
>seq140972
Length=1238
Score = 172 bits (190), Expect = 1e-40
Identities = 243/337 (72%), Gaps = 6/337 (2%)
Strand=Plus/Minus
Query 9 GAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTA 68
|| ||| ||||||||||| |||||||||||||||||||||||| |||||| ||| |||
Sbjct 746 GAAGAAACCCCGGCTAACCTCGTGCCAGCAGCCGCGGTAATACGAAGGGGGTGAGCATTA 687
Query 69 TCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCT 128
||| ||| | |||||||||||||| ||||| | | | ||| | ||||||| |
Sbjct 686 TCCAAAATGATTGGGCGTAAAGGGTTCGTAGATTGCAAATGTTTTCATATGTGAAAGTTT 627
Query 129 ATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTG 188
| | || | ||| | ||| ||| | ||| |||| | | | | |
Sbjct 626 AA---TTAAAATTAAAAATGCGTATGATACTCCTTTGCTTGAGTATATTATGAGATAACA 570
Query 189 GAATTCC-TAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTGGCGAAGGC 247
||||| ||| | || ||||||| | ||||| | | ||||| ||||||||| | ||
Sbjct 569 GAATTTTATAGGG-AGGAGTGAAATCCATAGATCTATGAAGGAATGCCAGTGGCGGAAGC 511
Query 248 GGCTTGCTGGACTGTA-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAG 306
|| | || || | | ||||||| ||||| ||||||| ||||||||||||||||||||
Sbjct 510 GGTTATCTAGAATATTTACTGACATTGAGGAACGAAAGCATGGGGAGCAAACAGGATTAG 451
Query 307 ATACCCTGGTAGTCCACGCCGTAAACGATGAATACTA 343
|||||||||||||||| || || || |||||| |||
Sbjct 450 ATACCCTGGTAGTCCATGCTGTCAATTATGAATGCTA 414
>seq4656
Length=104629
Score = 73.4 bits (80), Expect = 9e-11
Identities = 48/53 (91%), Gaps = 0/53 (0%)
Strand=Plus/Minus
Query 296 AACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGT 348
||||||||||||||||||||||||||||||| |||||||||| ||| | |||
Sbjct 92243 AACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGATGATGACTCGATGT 92191
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1201031400448
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |