Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq50242 235 1e-59
seq1079 122 2e-25
seq8133 93.3 8e-17
seq47552 80.6 5e-13
>seq50242
Length=7886
Score = 235 bits (260), Expect = 1e-59
Identities = 132/133 (99%), Gaps = 0/133 (0%)
Strand=Plus/Plus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 53 GAACGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 112
Query 80 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 113 AGGGACTATCGGCTCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTA 172
Query 140 GATGTTCTGGGCC 152
|||||||||||||
Sbjct 173 GATGTTCTGGGCC 185
>seq1079
Length=207171
Score = 122 bits (134), Expect = 2e-25
Identities = 159/215 (74%), Gaps = 10/215 (5%)
Strand=Plus/Plus
Query 121 CAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGC---C 177
||||||||||||||||| |||||| | |||||||||| |||||||| | ||||| |
Sbjct 182881 CAGGTCTGTGATGCCCTAAGATGTCCGGGGCCGCACGTGCGCTACAGT---AGAGCGGAC 182937
Query 178 AACGAG-TTCATCA--CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTC-GTG 233
|||| | ||| | |||||||| | || || ||||| | | || | || |||
Sbjct 182938 AACGTGCTTCTTTGTTCCTTGGCCTGTCGGCCTAGGTAACCAGAGCAGTCTGTCTCAGTG 182997
Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293
||||||| | |||| |||| || | || ||||||||||| ||||||| ||||| |||
Sbjct 182998 CTGGGGACCTGGGATTGTAATTGTTCCCCTCCAACGAGGAATTCCTAGTAGGCGCGAGTC 183057
Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|| | | || | || || ||| ||||||||||||
Sbjct 183058 ATTAACTCGTGCCGACTAAGTCACTGCCCTTTGTA 183092
>seq8133
Length=71924
Score = 93.3 bits (102), Expect = 8e-17
Identities = 185/266 (70%), Gaps = 15/266 (6%)
Strand=Plus/Minus
Query 72 CTTCTTAGAGGGACTATCGGCTCA--AGCCGATGGAAGTTTGAGGCAATAACAGGTCTGT 129
||||||||| |||| |||||| | ||||| ||| ||| | | |||||||||
Sbjct 20419 CTTCTTAGAAGGACCGTCGGCTTAGAAGCCGTACGAAAAG-GAGCGACTG-CAGGTCTGT 20362
Query 130 GATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGC---CAACGAGTTC 186
|||||||| ||||| ||||| |||| | |||||| | ||||| ||||| | |
Sbjct 20361 GATGCCCTAAGATGCCTGGGGCCACACGTGTGCTACAGT---AGAGCGGACAACGTGCTT 20305
Query 187 ATCA---CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTC-GTGCTGGGGATA 242
|| |||||||| | || || ||||| | | | || || |||||||||| |
Sbjct 20304 ATTTGTTCCTTGGCCTGTTGGCCTCGGTAACCGATGCAGTCCCTCTCAGTGCTGGGGACA 20245
Query 243 GAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACG 302
| | |||| |||| || | || ||||||||||| |||||||| | || || | | ||
Sbjct 20244 GGGGATTGTAATTGTTCCCCTCCAACGAGGAATTCCTAGTAA-AAAGAGTTATTAACTCG 20186
Query 303 CGTTGATTACGTCCCTGCCCTTTGTA 328
| || || ||| ||||||||||||
Sbjct 20185 TGACGACTAAGTCACTGCCCTTTGTA 20160
>seq47552
Length=8852
Score = 80.6 bits (88), Expect = 5e-13
Identities = 120/167 (72%), Gaps = 9/167 (5%)
Strand=Plus/Minus
Query 121 CAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGC---C 177
|||||||||||||||| |||||| | || ||||||| |||||||| | ||||| |
Sbjct 8831 CAGGTCTGTGATGCCCCAAGATGTCCGGGACCGCACGTGCGCTACAGT---AGAGCGGAC 8775
Query 178 AACGAGTT--CATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTC-GTGC 234
|||| | | | ||||||||| | || || ||||| | | | | || ||||
Sbjct 8774 AACGTGCTGAAAGTACCTTGGCCTGTCGGCCTCGGTAACCAGAGCAGTCCTTCTCAGTGC 8715
Query 235 TGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAG 281
| ||||| | | |||| |||| || | || ||||||||||| |||||
Sbjct 8714 TAGGGATCGGGGATTGTAATTGTTCCCCTCCAACGAGGAATTCCTAG 8668
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 945492804608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |