Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01002205.1 Length=300 Score E Sequences producing significant alignments: (Bits) Value seq26 102 1e-19 seq56204 82.4 1e-13 >seq26 Length=549101 Score = 102 bits (112), Expect = 1e-19 Identities = 138/191 (72%), Gaps = 1/191 (1%) Strand=Plus/Plus Query 25 TCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGAAGGTCCATGTGCACGTCGGCA 84 ||||| || || |||||||| ||||||||||||||||| |||||||||||| |||| Sbjct 456512 TCGATGACATCGTGCAGCATGGCGGCCATCAGGCTCTGGTGGTCCATGTGCATGTCGCAG 456571 Query 85 AGAATATTCGGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCACTACGTCGGCGTTG 144 || || | | || ||||| || || || ||||| || | ||||| | || ||| || Sbjct 456572 AGGATGTGC-GCGACCGCGAGCGGGTGCGTGACGTAGGGATCGCCGTTGCGACGGAACTG 456630 Query 145 GCCGTCGTGGGCTTGTTCGGCGTAGAAATACGCTCGGCGAACCAGGTTGACCTGGTCTGC 204 |||| |||||| | ||||| | | || || || ||||| | |||||||| | Sbjct 456631 GCCGAGGTGGGCCTTTTCGGAAAACAGGTAGGCGCGACGAACTTCCTCTACCTGGTCGGA 456690 Query 205 GCCGAGGTAGG 215 | |||||||| Sbjct 456691 GGTGAGGTAGG 456701 >seq56204 Length=6574 Score = 82.4 bits (90), Expect = 1e-13 Identities = 100/135 (74%), Gaps = 1/135 (1%) Strand=Plus/Plus Query 24 TTCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGAAGGTCCATGTGCACGTCGGC 83 ||| ||||||||||||| || || |||||||| | | | |||| | ||||| | |||| Sbjct 2362 TTCAATCACGTCATGCATCAGGGCAGCCATCAGTGTTTCATGGTCTAAGTGCATGCCGGC 2421 Query 84 AAGAATATTCGGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCACTACGTCGGCGTT 143 ||| || || | ||| | | ||| ||||||| ||| | ||||||||| || || Sbjct 2422 AAGTAT-TTGTGTCACTTCGACAGGGTGGGTGATATAAGGCTCGCCACTTGAGCGTGTTT 2480 Query 144 GGCCGTCGTGGGCTT 158 |||| |||||||||| Sbjct 2481 GGCCTTCGTGGGCTT 2495 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 856054296064