Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq48204 410 4e-112 seq4984 298 2e-78 seq21163 279 2e-72 seq44255 233 7e-59 seq1223 167 8e-39 seq146714 158 4e-36 >seq48204 Length=5524 Score = 410 bits (454), Expect = 4e-112 Identities = 304/357 (85%), Gaps = 10/357 (3%) Strand=Plus/Plus Query 208 ACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCACCTATCCTACACAAACCGCAC 267 |||||||| ||| |||| || ||| ||||||||||||||||||||||| || ||| Sbjct 1 ACTCCACATGAACTGGCGTCCATGCTTCACAGTCTCCCACCTATCCTACACAAGCCACAC 60 Query 268 CGAATGCCAATACCAAGCTATAGTGAAGGTCCCGGGGTCTTTTCGTCCTGCCGCGCGAAA 327 |||| ||||||||||||| |||| |||||| |||||||||| |||||||| ||||| || Sbjct 61 CGAACACCAATACCAAGCTGTAGTAAAGGTCACGGGGTCTTTCCGTCCTGCTGCGCGTAA 120 Query 328 CGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTC 387 |||||||||||||||||| ||||||||| ||| | | |||||||||||| ||| |||| Sbjct 121 CGAGCATCTTTACTCGTAGTGCAATTTCGCCGAGTTCGCGGTTGAGACAGCTGGGAAGTC 180 Query 388 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGG 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGG 240 Query 448 TTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTG 507 ||||||||||||||||||||||||||||||| |||| || || | || Sbjct 241 TTATAGTTACCACCGCCGTTTACTGGGGCTTAAATTCAGAGCTTCGC----------TTG 290 Query 508 TGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTCG 564 ||| || ||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 291 CGCTAACCCCTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACATCG 347 >seq4984 Length=100180 Score = 298 bits (330), Expect = 2e-78 Identities = 402/560 (72%), Gaps = 21/560 (4%) Strand=Plus/Plus Query 5 CTTGTAAGTCTCGCAGTCAAGCTCCCTTGTGCACTTACACTCACCACCTGATTGCCAACC 64 ||||| || |||||||||| || ||| ||| ||| ||| | | |||||| || ||| Sbjct 67727 CTTGTCAGCCTCGCAGTCAGGCAAGCTTATGCCATTATACTATCAAGCTGATTTCCGACC 67786 Query 65 AGGCTGAGGGAACCTTTGGGCGCCTCCGTTACATTTTGGGAGGGCAACCGCCCCAGTTAA 124 || || ||||| | |||||||||||| |||| ||||| | ||||||||||| || Sbjct 67787 AGCTCTAGCTTACCTTCGCACGCCTCCGTTACTTTTTAGGAGG-CGACCGCCCCAGTCAA 67845 Query 125 ACTACCCACCAGGCACTGTCCCCAACCCAGATCATGGGCCAAGGTTAGATATCCACTACG 184 ||||||||||| || ||||| |||||| ||| || |||||||||| | | Sbjct 67846 ACTACCCACCATACAATGTCCTAGTTCCAGATAATGAAACATAGTTAGATATCAAAAGTG 67905 Query 185 GTCAGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCC 244 || ||||||| |||| ||||||| | |||||| | ||| ||||||| Sbjct 67906 TAAAGGGTGGTATCTCAAGTTTGACTCCATTATAGCTAGCGCCATAACTTCAAAGTCTCC 67965 Query 245 CACCTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGG 303 |||||||||| |||| | | ||| |||| |||||||||| ||||| | |||| Sbjct 67966 CACCTATCCTGCACATCACACTTTTAATAGCAATGTAAAGCTATAGTAAAGGTGCACGGG 68025 Query 304 GTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCC 363 |||| |||||| ||||| | | | |||||| || | | | ||||||| | | Sbjct 68026 GTCTCTTCGTCTAACCGCGGGTACCCCGCATCTGCACGGGGAATTCAATTTCGCTGAAGT 68085 Query 364 TGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACA 423 || | ||||||| | | | |||||||||||||||||| ||||||||||||||||||| Sbjct 68086 GATGTTGGAGACAGTGGAGAAATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACA 68145 Query 424 AGGAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483 ||||||||||||||||||||| || | ||||| |||||||||||||||||||||||| Sbjct 68146 AGGAATTTCGCTACCTTAGGACCGTCAGTGTTACGGCCGCCGTTTACTGGGGCTTCAATT 68205 Query 484 ACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCA 543 | || ||| || |||| ||||||||||||||||||||| Sbjct 68206 TAGAG-CTTGCACCCC------------------TCCTATTAACCTTCCAGCACCGGGCA 68246 Query 544 GGCGTCAGTCCGTATACCTC 563 |||||||| || ||||| || Sbjct 68247 GGCGTCAGACCCTATACTTC 68266 >seq21163 Length=23524 Score = 279 bits (308), Expect = 2e-72 Identities = 243/298 (82%), Gaps = 3/298 (1%) Strand=Plus/Minus Query 188 AGAGTGGTATTTCAACAACGACTCCACAACCACTAGCGTGGCCGCATCATAGTCTCCCAC 247 || ||||||||||||| || |||||||| |||||||||| | || ||| || ||||||| Sbjct 23515 AGGGTGGTATTTCAACGTCGGCTCCACAAACACTAGCGTGCCTGCTTCAAAGCCTCCCAC 23456 Query 248 CTATCCTACACAAACCGCACCGAATGCCAATACCAAGCTATAGTGAAGGTCC-CGGGGTC 306 |||||||||||| | || || | |||||| ||| |||||| ||||| | | ||||| Sbjct 23455 CTATCCTACACATTACTTACTCAAAGTCAATACGAAGTTATAGTAAAGGTTCACAGGGTC 23396 Query 307 TTTTCGTCCTGCCGCGCGAAACGAGCATCTTTACTCGTACTGCAATTTCACCGGGCCTGT 366 ||||||||| ||| | || ||||||| || |||| ||||||||||| || || Sbjct 23395 TTTTCGTCCCATTGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACCGAGCTCGT 23336 Query 367 GGTTGAGACAGCAGGGGAG-TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAG 425 || |||||||| | || ||||||| |||||||||||||||||||||||||||||||| Sbjct 23335 GGCTGAGACAGT-GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAG 23277 Query 426 GAATTTCGCTACCTTAGGATGGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATT 483 ||||||||||||||||||| ||||||||||| |||||||||||||||||||| ||| Sbjct 23276 GAATTTCGCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCGATT 23219 >seq44255 Length=9396 Score = 233 bits (258), Expect = 7e-59 Identities = 221/284 (78%), Gaps = 20/284 (7%) Strand=Plus/Plus Query 282 AAGCTATAGTGAAGGTCC-CGGGGTCTTTTCGTCCTGCCGCGCGAAACGAGCATCTTTAC 340 |||||||||| ||||| | |||||||||| |||| |||| || ||| ||||||| || Sbjct 5846 AAGCTATAGTAAAGGTTCACGGGGTCTTTCCGTCTTGCCACGGGAACGCTGCATCTTCAC 5905 Query 341 TCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACGCCATTCG 400 | | ||||||||| | | || ||| |||||||| | |||||||||||||||| Sbjct 5906 AGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCTGTCGTTACGCCATTCG 5965 Query 401 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAGTTACCAC 460 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct 5966 TGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAGTTACGGC 6025 Query 461 CGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCACGAGTCC 520 ||||||||||||||||||| ||| || | | | ||| ||| Sbjct 6026 CGCCGTTTACTGGGGCTTCGATT----------CAGAGCTTG---------CACCCCTCC 6066 Query 521 TCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTCG 564 ||||||||||||||||||||||||||||||| || ||||| ||| Sbjct 6067 TCTTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCG 6110 >seq1223 Length=197574 Score = 167 bits (184), Expect = 8e-39 Identities = 139/170 (82%), Gaps = 10/170 (6%) Strand=Plus/Minus Query 394 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAG 453 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 4332 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATAG 4273 Query 454 TTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGGTGTGCTCA 513 |||| |||||||||||||||||||||||| || || | || | | | Sbjct 4272 TTACGGCCGCCGTTTACTGGGGCTTCAATTCAATGCTTCTC------CG----AAGATAA 4223 Query 514 CGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTC 563 | |||||||||||||||||||||||||||| ||||| || ||||| || Sbjct 4222 CATCTCCTCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACTTC 4173 >seq146714 Length=1191 Score = 158 bits (174), Expect = 4e-36 Identities = 141/178 (79%), Gaps = 19/178 (11%) Strand=Plus/Plus Query 386 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAT 445 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5 TCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGAC 64 Query 446 GGTTATAGTTACCACCGCCGTTTACTGGGGCTTCAATTACCCGCCTCACACACCACGTGG 505 ||||||||||| ||||||||||||||| ||||| | | | || ||| ||| Sbjct 65 CGTTATAGTTACGGCCGCCGTTTACTGGGACTTCAGTCAAGAG-CTTGCACCCCA----- 118 Query 506 TGTGCTCACGAGTCCTCTTAACCTTCCAGCACCGGGCAGGCGTCAGTCCGTATACCTC 563 ||| |||| ||||||||||||||||||||||| ||| ||||| || Sbjct 119 -----TCA--------TTTAATCTTCCAGCACCGGGCAGGCGTCACTCCCTATACGTC 163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1699331662336