Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_011356.1 Length=54896 Score E Sequences producing significant alignments: (Bits) Value seq11269 167 8e-37 >seq11269 Length=54388 Score = 167 bits (184), Expect = 8e-37 Identities = 293/429 (68%), Gaps = 36/429 (8%) Strand=Plus/Plus Query 6406 TTCGACAATGCGCTCGGCTTCATCCTTGTCATAGATACCAGCAAATCCGAAGGCCAGACG 6465 ||| || || |||||||| || |||| ||| || || || || || ||||| || || || Sbjct 43124 TTCAACGATCCGCTCGGCCTCGTCCTGGTCGTATATGCCGGCGAACCCGAACGCGAGGCG 43183 Query 6466 GGCACACTGAATCATGGCTTTATGCCGTAACATCCGTTTGGGATGCGACTGCCACGGTCC 6525 || ||||||||||| || || || || ||||| || || || ||||||||||| || Sbjct 43184 TGCGCACTGAATCATTGCCTTGTGGCGCAACATGCGCTTCGGGTGCGACTGCCATGG--- 43240 Query 6526 GGTGATTTCTCTGCCTTCGCGGGTTTTGAATGGTTCGCGGCGGCATTCATCCATCCACTC 6585 || |||| ||| | || || || ||| |||| Sbjct 43241 --------------CT----GGGTGTTGC--GCTTA-------CACTCCGACATGTACTC 43273 Query 6586 GGTAACGCAGATCGGATGATTACGGTCTTTGCGGTAAATCCGGCA--TGTACAGGATTCA 6643 ||| | | | |||| || ||||||||||| || | || ||||| ||||| | ||| Sbjct 43274 GGTGATGGTGGTCGGGTGCTTACGGTCTTTCCGATGGATTCGGCAGGTGTACTCGCTTCC 43333 Query 6644 TTGTCCTG----CTCAAAGTCCATGCCATCAAACTGCTGGTTTTCATTGATGATGCGGGA 6699 | | | ||| || ||||||||||| |||||| ||| ||| |||||||| || || Sbjct 43334 GTCAGCCGGCATCTCGAAATCCATGCCATCGAACTGCGGGTGTTCGTTGATGATCCGCGA 43393 Query 6700 CCAGCCATCAACGCCCACCACCGGAACGATGCCGTTCTGCTTATCAGGGAAGGCGTAAAT 6759 |||||| || | ||| || ||||| || |||||||| | ||| || ||||||||||| | Sbjct 43394 CCAGCCGTCCAGGCCAACTACCGGCACAATGCCGTTGTTCTTGTCGGGGAAGGCGTACAA 43453 Query 6760 TTCTTTCGTCCACGGATTAAGGCCGTACTGGTTGGCGACGATCAACAATGCGATGAACTG 6819 ||||| || | || || || |||||||| ||| ||||||| || || | | ||| Sbjct 43454 CTCTTTGGTGAAGGGGTTCAGCTTGTACTGGTCGGCTACGATCAGCAGGGCAACCATCTG 43513 Query 6820 CGCATCGCT 6828 ||| || || Sbjct 43514 CGCGTCACT 43522 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 175169879313456