Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20]
180,236 sequences; 2,439,301,466 total letters
Query= NC_023503.1
Length=48800
Score E
Sequences producing significant alignments: (Bits) Value
seq5680 329 1e-85
seq42058 298 2e-76
seq23 273 7e-69
seq17291 217 5e-52
seq7 154 5e-33
seq10203 138 4e-28
seq1 104 7e-18
>seq5680
Length=92688
Score = 329 bits (364), Expect = 1e-85
Identities = 661/971 (68%), Gaps = 18/971 (2%)
Strand=Plus/Plus
Query 1948 ATGATCGCTCTTGACGGTACTCCAAACAAAGGTAAACTTGGTGCCAACGCTATTCTTGGT 2007
||||| | |||||| || || |||||||||||| | || || ||||||||| | ||
Sbjct 8497 ATGATTGATCTTGATGGAACCGAGAACAAAGGTAAATTAGGAGCAAACGCTATTTTAGGA 8556
Query 2008 GTGTCTATCGCTGTAGC--ACGC-GCAGCTGCTGACTACCTTGAAGTTCCACTTTACAGC 2064
|| ||| | || || || | || ||||| || | | || ||| | ||| |
Sbjct 8557 GTTTCTTTGGCAGTTGCCAAAGCTGCAGCGCAGGAAAGTCGTCAA---CCATTATACCGT 8613
Query 2065 TACCTTGGCGGATTCAACACTAAAGTTCTTCCAACTCCAATGATGAACATCATCAACGGT 2124
|| | || ||| | || | || | | ||| || ||||||||||||||||| |||
Sbjct 8614 TATATCGGAGGAGTAAATGCGAACACTTTGCCATTGCCGATGATGAACATCATCAATGGT 8673
Query 2125 GGTTCTCACTCAGACGCTCCAATCGCTTTCCAAGAATTTATGATTGTACCTGCTGGTGCA 2184
|| ||||||| || ||||| ||||| ||||| || || ||||| | || | |||||
Sbjct 8674 GGAGCTCACTCGGATGCTCCGATCGCATTCCAGGAGTTCATGATCATGCCAGTAGGTGCT 8733
Query 2185 CCAACATTCAAAGAAGCGCTTCGTTGGGGTGCTGAAATCTTCCACGCGCTT-AAGAAAAT 2243
| ||||| || || | ||||||||||| ||| | ||||| |||| ||||||||
Sbjct 8734 GAATCATTCTCTGAGGCATTGCGTTGGGGTGCAGAAGTTTTCCA-TAGCTTGAAGAAAAT 8792
Query 2244 CCTTAAAGAACGTGGACTTGAAACAGCCGTAGGTGACGAAGGTGGTTTCGCACCTCGTTT 2303
|||| | || ||| ||| ||||| ||||| || || ||||| ||||| || |||
Sbjct 8793 CCTTCATGACCGTAATCTTTCTACAGCAGTAGGCGATGAGGGTGGATTCGCTCCAACTTT 8852
Query 2304 CGACGGAACTGAAGATGGTGTTGAAACTATCATCAAAGCTATCGAAGCTGCTGGATATGT 2363
||| || || ||||||| | ||||| || | |||| ||| || || |||||
Sbjct 8853 CGAAGGTACGGAAGATGCGATCGAAACCATTTTGGAAGCGATCAAAAAAGCAGGATACAA 8912
Query 2364 ACCAGGTAAAGACGTATTTATCGGACTTGACTGTGCATCATCTGAATTCTACGATGCAGA 2423
|||||| || || | | | | | |||||||||||| || | ||||||| ||| | |
Sbjct 8913 ACCAGGAAAGGATATCTGTTTAGCACTTGACTGTGCTTCTACAGAATTCTTCGA---AAA 8969
Query 2424 ACGTAAAGTTTACGACTACACTAAATTTGAAGGTGAAGGCGCTGCTGTTCGTACTGCTGC 2483
| | ||| ||||| |||| ||||| |||||| |||||| ||| ||||| |
Sbjct 8970 AGGAAAA---TACGATTACAAGAAATTCGAAGGTAAAGGCGGTGCAACGCGTACCATCGA 9026
Query 2484 AGAACAAATCGACTACCTTGAAGAATTGGTTAACAAATACCCAATCATCACTATCGAAGA 2543
||| || | || ||||| | |||||| | |||||||| ||||| |||| |||||
Sbjct 9027 AGAGCAGGTAGATTACCTGGCAGAATTATCTGCAAAATACCCGATCATTTCTATTGAAGA 9086
Query 2544 TGGTATGGACGAAAACGACTGGGACGGTTGGAAATCTCTTACTGAACGTCTTGGTGGTAA 2603
|||||||| ||| | || ||| | || ||||||| | || || | || |
Sbjct 9087 TGGTATGGCTGAAGATGATTGGAAAGGATGGAAATTGTTGACAGATAAGATCGGCGACCG 9146
Query 2604 AGTTCAATTGGTTGGTGACGACTTCTTCGTAACTAACACTGCTTACCTTGAAA--AAGGT 2661
|| || ||||||||||| || || || || || || || | || || | | | |||
Sbjct 9147 CGTACAGTTGGTTGGTGATGATTTATTTGTTACAAATAC--CAAACGTTTACAGGATGGT 9204
Query 2662 ATTGCAGAACACGCTGCTAACTCAATCCTTATCAAAGTTAACCAAATCGGTACTTTGACT 2721
|||| || | || ||||| ||| | | ||||||||||||||||| | |||||
Sbjct 9205 ATTGATAAAGGTGTTGGAAACTCCATCTTGGTTAAAGTTAACCAAATCGGATCATTGACC 9264
Query 2722 GAAACTTTTGACGCTATCGAAATGGCGAAAGAAGCTGGATACACAGCAGTAGTATCACAC 2781
||||| | | ||| | || | || | | ||| || || | ||| | || |||
Sbjct 9265 GAAACAATCAATGCTGTTCAATTAGCTCAGACAAATGGTTATACGTCGGTAATGTCTCAC 9324
Query 2782 CGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATTGCAGTTGCAACTAACGCTGGT 2841
||||| || ||||| ||||||| || || |||||| | || || ||| ||| ||||
Sbjct 9325 CGTTCTGGAGAAACAGAAGATTTCACGATTGCTGATTTAGCGGTGGCATTGAACTGTGGT 9384
Query 2842 CAAATTAAGACAGGTTCATTGTCACGTACTGACCGTATTGCTAAATACAACCAATTGCTT 2901
|| || || || || || | || ||| | || | |||||||| ||||||||||| |
Sbjct 9385 CAGATCAAAACGGGATCTATCTCTCGTTCAGATAGGATTGCTAAGTACAACCAATTATTA 9444
Query 2902 CGTATCGAAGA 2912
||||| || ||
Sbjct 9445 CGTATTGAGGA 9455
>seq42058
Length=10148
Score = 298 bits (330), Expect = 2e-76
Identities = 826/1245 (66%), Gaps = 56/1245 (4%)
Strand=Plus/Plus
Query 1696 CGTGAAGTCCTTGACTCACGCGGTAACCCAACACTTGAAGTAGAAGT---TTACACTGAA 1752
|| ||| || | ||||| || ||||||||||| |||||| || || || ||||
Sbjct 8913 CGCGAAATCATGGACTCGCGTGGTAACCCAACTGTTGAAGCTGATGTACATTTAGCTGA- 8971
Query 1753 TCTGGTGCATTCGGTCGCGGTATGGTTCCTTCAGGAGCATCAACTGGTGAACACGAAGCA 1812
|||| ||| || || | | | ||||| || |||||||| ||| | ||||||
Sbjct 8972 --TGGTTCATGGGGCCGTGCTGCAGCACCTTCTGGTGCATCAACAGGTACTCGCGAAGCG 9029
Query 1813 GTAGAACTTCGTGATGGTGACAAAGCTCGTTACGGTGGTCTTGGTACTCAAAAAGCAGTT 1872
| ||| | ||||||||||| ||||| |||||| ||| ||| | |||||||||
Sbjct 9030 CTTGAATTACGTGATGGTGATAAAGCACGTTACCTAGGTAAAGGTGTTTTAAAAGCAGTA 9089
Query 1873 GATAACGTAAACAACGTTATTGCTGA-GCACATCATCGGATTCGACGTACGTGATCAACA 1931
| | | || |||| || ||||| || | | | || ||| | |||||| |
Sbjct 9090 GGCTATATCAATAACGAAATCGCTGAAGCGCTTAAA-GGTCAAAACGCAGTGGATCAAAA 9148
Query 1932 AGGTATTGACCGCGCAATGATCGCTCTTGACGGTACTCCAAACAAAGGTAAACTTGGTGC 1991
|| |||||| | |||| | | | || |||||| |||||||| ||||| |||||
Sbjct 9149 AGCGGTTGACCAAGTAATGCTTGACTTAGATGGTACTGAAAACAAAGAAAAACTAGGTGC 9208
Query 1992 CAACGCTATTCTTGGTGTGTCTATCGCTGTAGCACGCGCAGCTGCTGACTACCTTGAAGT 2051
|| ||||| | | ||||||| | || ||| || |||||| ||| | ||
Sbjct 9209 AAATGCTATCTTAGCTGTGTCTTTAGCAACAGCTAAAGCGGCTGCTAACTCTAAAGGCGT 9268
Query 2052 TCCACTTTAC-AGCTACCTTGGCGGATTCAAC---ACTAAAGTTCTTC---CAACTCCA- 2103
| ||||| ||| || ||| | || ||| || || | || ||| |||
Sbjct 9269 TGAGCTTTATGAGC-ACATTGCAGACTTAAACGGCACACCAGGTGTTTACTCAATGCCAT 9327
Query 2104 -----ATGATGAACATCATCAACGGTGGTTCTCACTCAGACGCTCCAATCGCTTTCCAAG 2158
|||||||||||||||||||||||| ||| | || | | | | | ||||
Sbjct 9328 TACCTATGATGAACATCATCAACGGTGGTGAGCACGCTGATAACTCTGTTGATATTCAAG 9387
Query 2159 AATTTATGATTGTACCTGCTGGTGCACCAACATTCAAAGAAGCGCTTCGTTGGGGTGCTG 2218
| || ||||| || | ||| || ||| ||| |||||| | || ||| ||||
Sbjct 9388 AGTTCATGATCCAGCCAGTTGGCGCTACAAACTTCCGTGAAGCGTTACGCATGGGCGCTG 9447
Query 2219 AAATCTTCCACGCGCTTAAGAAAA-TCCTTAAAG---AACGTGGACTTGAAACAGCCGTA 2274
|| | |||||| || || |||| | ||||||| || || ||| | || | |||
Sbjct 9448 AAGTTTTCCACA-GCCTAGCAAAAGTACTTAAAGCTGAAGGTC-ACTCTA--CATCAGTA 9503
Query 2275 GGTGACGAAGGTGGTTTCGCACCTCGTTTCGACGGAACTGAAGATGGTGTTGAAACTATC 2334
||||| ||||||||||| || ||| | || || |||| | ||| | |||
Sbjct 9504 GGTGATGAAGGTGGTTTTGCTCCTAACCTTGAATCAAACGAAGCGGCACTTGCTGCAATC 9563
Query 2335 ATCAAAGCTATCGAAGCTGCTGGATATGTACCAGGTAAAGACGTATTTATCGGACTTGAC 2394
| ||| | | | ||| || |||| | |||||||| | | | | || |||
Sbjct 9564 AAGGTCGCTGTTGCAAATGCAGGTTATGAGCTTGGTAAAGATATCACTCTAGCTCTAGAC 9623
Query 2395 TGTGCATCATCTGAATTCTACGATGCAGAACGTAAAGTTTACGA-CTACACTAAATTTGA 2453
||||| ||||||| |||||||| |||| || | ||||| || |||| ||
Sbjct 9624 TGTGCGGCATCTGAGTTCTACGACAAAGAAGCGAATATCTACGATCT----TAAAGGCGA 9679
Query 2454 AGGTGAAGGCGCTGCTGTTCGTACTGCTGCAGAACAAATCGACTACCTTGAAGAATTGGT 2513
|||| || ||| ||| ||| |||| | | ||| |||| ||| |
Sbjct 9680 AGGTAAAAAA-------TTC--ACTTCTGAAGAATTCAACCACTTCCTTAAAG----GCC 9726
Query 2514 TAACA----AATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACG 2569
| ||| |||||||||| | | || ||||| || | || || || ||||| |
Sbjct 9727 TTACAGAGCAATACCCAATTGTTTCAATTGAAGACGGCTTAGATGAGTCTGATTGGGATG 9786
Query 2570 GTTGGAAATCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCT 2629
||| | | || ||| |||| | ||||| ||||| || ||||| || | |
Sbjct 9787 GTTTCGCACACCAAACACAACTAATTGGCGACAAAGTACAATTAGTAGGTGATGATCTTT 9846
Query 2630 TCGTAACTAACACTGCTTACCTTGAAAAA-GGTATTGCAGAACACGCT-GCTAACTCAAT 2687
||||||||||||| | ||| || ||||||| | ||| | |||||||||||
Sbjct 9847 TCGTAACTAACACAAAG-ATCTTAAAGCGTGGTATTG-ATAACGGTATTGCTAACTCAAT 9904
Query 2688 CCTTATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGC 2747
||| ||||| | |||||||||||| | || |||||||| ||| |||||| |||||||
Sbjct 9905 CCTAATCAAGTTCAACCAAATCGGTTCATTAACTGAAACGCTTGCTGCTATCAAAATGGC 9964
Query 2748 GAAAGAAGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAAC 2807
||||| ||||| | |||||| || | ||||||||||||||||||||||||||| | ||
Sbjct 9965 TAAAGACGCTGGCTTCACAGCTGTTATCTCACACCGTTCAGGTGAAACTGAAGATGCGAC 10024
Query 2808 AATCGCTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACG 2867
||| |||||| | ||||| | ||| || |||||||| || || |||||||| ||
Sbjct 10025 AATTGCTGATTTAGCAGTAGGTACTGCAGCGGGTCAAATCAAAACGGGTTCATTAAGCCG 10084
Query 2868 TACTGACCGTATTGCTAAATACAACCAATTGCTTCGTATCGAAGA 2912
| |||||||||||||||| ||||||||||| ||||| || |||||
Sbjct 10085 TTCTGACCGTATTGCTAAGTACAACCAATTACTTCGCATTGAAGA 10129
>seq23
Length=559261
Score = 273 bits (302), Expect = 7e-69
Identities = 819/1248 (66%), Gaps = 62/1248 (5%)
Strand=Plus/Plus
Query 1693 GCACGTGAAGTCCTTGACTCACGCGGTAACCCAACACTTGAAGTAGAAGT--TTACACTG 1750
||||| ||| | | ||||| || ||||||||||| | |||| ||| || || | |
Sbjct 398417 GCACGCGAAATTTTGGACTCTCGTGGTAACCCAACCATCGAAGCAGACGTAATTTTA--G 398474
Query 1751 AATCTGGTGCATTCGGTCGCGGTATG-GTTCCTTCAGGAGCATCAACTGGTGAACACGAA 1809
||||||| | | ||||| | ||| | || || || || ||||||||| | |||
Sbjct 398475 AATCTGGGGTTGTTGGTCGTGC-ATGTGCACCATCTGGTGCTTCAACTGGTTCTCGTGAA 398533
Query 1810 GCAGTAGAACTTCGTGATGGTGACAAAGCTCGTTACGGTGGTCTTGGTACTCAAAAAGCA 1869
|| ||||||||||||| || || ||| |||||||| ||| ||| || | ||||
Sbjct 398534 GCTTTAGAACTTCGTGACGGAGATAAATCTCGTTACTTAGGTAAAGGTGTTCGTACAGCA 398593
Query 1870 GTTGATAACGTAAACAACGTTATTGCTGAGCACATCATCGGATTCGAC-GTACGTGATCA 1928
||| | || || |||| | ||| ||| | | | | || | | || ||| ||
Sbjct 398594 GTTAACAATGTTAACACATTGATTCGTGA-CGCTTTGTTGGGTAAATCAGTTTTTGAGCA 398652
Query 1929 ACAAGGTATTGACCGCGCAATGATCGCTCTTGACGGTACTCCAAACAAAGGTAAACTTGG 1988
| ||| ||||| |||||||||| ||||| || ||| |||||||| ||| | ||
Sbjct 398653 AAAAGACATTGATAATACAATGATCGCGCTTGATGGCACTGAAAACAAAGAAAAATTAGG 398712
Query 1989 TGCCAACGCTATTCTTGGTGTGTCTATCGCTGTAGCACGCGCAGCTGCTGACTACCTTGA 2048
||| ||||| | | | | || ||| | |||| || || || |||||||| | |
Sbjct 398713 TGCAAACGCAACTTTAGCAGTTTCTTTAGCTGCTGCGCGTGCTGCTGCTGAAGAAAAGAA 398772
Query 2049 AGTTCCACTTTACAGCTA---------CCTTGGCGGATTCAACACTAAAGT---TCTTCC 2096
| |||| |||| | || |||| | || |||| |||| | | | ||
Sbjct 398773 ACTTCCTCTTTTCCAATATATCGCAGACCTTCGTGG--TCAA-ACTATCTTGACTATGCC 398829
Query 2097 AACTCCAATGATGAACATCATCAACGGTGGTTCTCACTCAGACGCTCCAATCGCTTTCCA 2156
|| |||||||||||| ||||||||||| || |||| | | | | | ||
Sbjct 398830 TGTACCGATGATGAACATCCTCAACGGTGGTGAGCATGCAGATAACACTGTTGATATTCA 398889
Query 2157 AGAATTTATGATTGTACCTGCTGGTGCACCAACATTCAAAGAAGCGCTTCGTTGGGGTGC 2216
||| || ||||||| || | |||| | |||| |||||| | ||| |||||
Sbjct 398890 AGAGTTCATGATTGAGCCAGTTGGTTTCACTTCATTTGCTGAAGCGTTACGTGCTGGTGC 398949
Query 2217 TGAAATCTTCCACGCGCTTAAGAAAATCCTTAAAGAACGTGGACTTGAA-ACAGCCGTAG 2275
|||| | ||||| | |||| | | |||||||| | || || || || || |
Sbjct 398950 TGAAGTATTCCATTCT-TTAAAATCAGTTTTAAAGAAACAAGGTTTAAATACTGCAGTTG 399008
Query 2276 GTGACGAAGGTGGTTTCGCACCTCGTTTCGACGGAACTGAAGATGGTGTTGAAACTATCA 2335
|||| ||||||||||| |||||| || | | |||||| | | || |||
Sbjct 399009 GTGATGAAGGTGGTTTTGCACCTAACTTGCGCTCTAATGAAGAAGCGATCCAAGTTATTT 399068
Query 2336 TCAAAGCTATCGAAGCTGCTGGATATGTACCAGGTAAAGACGTATTTATCGGACTTGACT 2395
| |||| || || |||| ||| | | |||| ||| | | | | | ||||
Sbjct 399069 TACAAGCAATTGAGTTAACTGGTTATAAAGCTGGTACTGACATGATGCTTGCTTTAGACT 399128
Query 2396 GTGCATCATCTGAATTCTACGATGCAGAACGTAAAGTTTACGACTACACTAAATTTGAAG 2455
| ||||| ||||| |||||| | |||| || | ||| | || ||||
Sbjct 399129 GCGCATCTTCTGAGTTCTACAAA----AACG----GTCAA----TACGTT---TTAGAAG 399173
Query 2456 GTGAAGGCGCTGCTGTTCGTACTGCTGCAGAACAAATCGACTACCTTGAAGAATTGGTT- 2514
| ||||| | ||| || | || || ||| | | || || | || | |
Sbjct 399174 GCGAAGG------TAACCGTGCT--TTCACAAGCCATCAATTTGCT-GATTATTTAGCTG 399224
Query 2515 --------AACAAATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGG 2566
|| |||| || |||||| | |||||||||||| |||| ||| || ||||
Sbjct 399225 GTCTTGCAAATCAATATCCTATCATCTCGATCGAAGATGGTTTGGATGAATCTGATTGGG 399284
Query 2567 ACGGTTGGAAATCTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACT 2626
| ||||||| | | || | |||||||| ||| | ||||||||||||||||| |
Sbjct 399285 AGGGTTGGAGCTACTTAACATCAATTCTTGGTGACAAAATCCAATTGGTTGGTGACGATT 399344
Query 2627 TCTTCGTAACTAACACT--GCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTC 2684
| |||||||| ||| || | || | || ||||||| || | | | ||||||
Sbjct 399345 TATTCGTAACAAACCCTAAGATTT--TACAACGTGGTATTGATGAGAAAGTAGGTAACTC 399402
Query 2685 AATCCTTATCAAAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAAT 2744
|| || |||||| ||||||||||||||||||||||||||| || || |||||| | |
Sbjct 399403 TATTCTGATCAAATATAACCAAATCGGTACTTTGACTGAAACATTAGATGCTATCTATCT 399462
Query 2745 GGCGAAAGAAGCTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTC 2804
|| |||| | ||| || || | || | ||||| ||||| |||||||| ||||||||
Sbjct 399463 AGCTAAAGCAAATGGCTATTCAACTGTTATTTCACATCGTTCTGGTGAAACAGAAGATTC 399522
Query 2805 AACAATCGCTGATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTC 2864
|| || ||||| | ||||| | || ||||||||||||||||| ||||| | |
Sbjct 399523 GACTATTGCTGACTTGGCAGTAGGTACAGCAGCTGGTCAAATTAAGACTGGTTCTCTATG 399582
Query 2865 ACGTACTGACCGTATTGCTAAATACAACCAATTGCTTCGTATCGAAGA 2912
||| |||| || |||| ||||| |||||||| |||||||| |||||
Sbjct 399583 CCGTTCTGATCGCGTTGCAAAATATAACCAATTACTTCGTATTGAAGA 399630
>seq17291
Length=33881
Score = 217 bits (240), Expect = 5e-52
Identities = 287/397 (72%), Gaps = 6/397 (2%)
Strand=Plus/Minus
Query 2519 AATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAAT 2578
|||| || || ||| | || ||||||||| | || ||| || ||||| ||||||| |
Sbjct 10493 AATATCCTATTATCTCAATTGAAGATGGTCTTGATGAATCTGATTGGGAAGGTTGGAGCT 10434
Query 2579 CTCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACTA 2638
| || | |||||| | |||| | ||||||||||||||||| || ||||| || |
Sbjct 10433 ACTTAACATCAATTCTTGGCGATAAAATCCAATTGGTTGGTGACGATTTATTCGTGACGA 10374
Query 2639 ACACTGCTTACCTTGAAAAA---GGTATTGCAGAACACGCTGCTAACTCAATCCTTATCA 2695
| | || | || | || ||||||| || | | | |||||| ||||| ||||
Sbjct 10373 A---TCCTAAGATTTTACAACGTGGTATTGATGAGAAAGTAGGTAACTCTATCCTGATCA 10317
Query 2696 AAGTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAG 2755
|| |||||||| || || || | ||||| || || || || | | || |||| |
Sbjct 10316 AATACAACCAAATTGGGACATTAAGCGAAACCTTAGATGCAATTTACCTTGCTAAAGCAA 10257
Query 2756 CTGGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTG 2815
||| || || | ||| | || || ||||| ||||| || |||||||||||||| ||||
Sbjct 10256 ATGGTTATTCAACTGTAATCTCTCATCGTTCTGGTGAGACAGAAGATTCAACAATTGCTG 10197
Query 2816 ATATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACC 2875
|| | ||||||| || || |||||||||||||| |||||| | | ||| ||||||
Sbjct 10196 ATTTAGCAGTTGGTACAGCAGCGGGTCAAATTAAGACTGGTTCACTTTGCCGTTCTGACC 10137
Query 2876 GTATTGCTAAATACAACCAATTGCTTCGTATCGAAGA 2912
|| |||| ||||| ||||||||||||||||| |||||
Sbjct 10136 GTGTTGCGAAATATAACCAATTGCTTCGTATTGAAGA 10100
>seq7
Length=747525
Score = 154 bits (170), Expect = 5e-33
Identities = 271/390 (69%), Gaps = 6/390 (2%)
Strand=Plus/Minus
Query 2523 CCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAATCTCT 2582
||| ||| || | || ||||||||| |||| || |||||||| || |||||| |||
Sbjct 618679 CCCGATCGTCTCAATTGAAGATGGTCTGGATGAGTCAGACTGGGATGGCTGGAAAGATCT 618620
Query 2583 TACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACTAACAC 2642
||| | ||||| | || || || |||| ||||| ||||| || || || |||||
Sbjct 618619 GACTAACAAAATTGGTAGCAAGGTGCAGCTGGTCGGTGATGACTTGTTTGTCACCAACAC 618560
Query 2643 TGCTTACCTTGAAAAA-GGTATTG--CAGAACACGCTGCTAACTCAATCCTTATCAAAGT 2699
| ||||| ||||||| ||| | || |||||| || || ||||| |
Sbjct 618559 CAAG-ATCTTGACCCGCGGTATTGAGCAGGGTAT--TGGTAACTCCATTCTGATCAAGTT 618503
Query 2700 TAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAGCTGG 2759
|||||||||||| | |||| || || | | || ||| | ||||| ||||| || ||
Sbjct 618502 TAACCAAATCGGCTCGCTGACCGAGACGCTGGCAGCCATCAAGATGGCTAAAGATGCCGG 618443
Query 2760 ATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATAT 2819
| || || ||| | ||||||||| ||||||||||| ||| | ||||||||| |
Sbjct 618442 CTTTACCGCGGTAATTTCACACCGTAGCGGTGAAACTGAGGATGCCTTTATCGCTGATTT 618383
Query 2820 TGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTAT 2879
||||| | || || ||||||||||| || |||||| ||| || | || || |
Sbjct 618382 AGCAGTGGGTACCGCTGCCGGTCAAATTAAAACCGGTTCACTGTGCCGCTCGGATCGGGT 618323
Query 2880 TGCTAAATACAACCAATTGCTTCGTATCGA 2909
|||||| |||||||| || || || || ||
Sbjct 618322 TGCTAAGTACAACCAGTTACTGCGGATTGA 618293
>seq10203
Length=59351
Score = 138 bits (152), Expect = 4e-28
Identities = 256/374 (68%), Gaps = 4/374 (1%)
Strand=Plus/Plus
Query 2520 ATACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAATC 2579
||| ||||| || |||| ||||||| ||| ||| |||||| || ||||||||||
Sbjct 23758 ATATCCAATAATTTCTATAGAAGATGCAATGAGTGAAGACGACTATGAAGGTTGGAAATT 23817
Query 2580 TCTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACTAA 2639
||||||| | | || ||||| ||||||||||||| || || || || || || ||
Sbjct 23818 ACTTACTGCAAAATTGGGGAGTAAAATTCAATTGGTTGGGGATGATTTATTTGTTACAAA 23877
Query 2640 CACTG--CTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAATCCTTATCAAA 2697
|| || | | | ||||| || | |||| | || || | | || |||||
Sbjct 23878 TTGTGAACTAA--TAGGCAAAGGAATAGAAGAAAAAATGGCAAATGCTGTACTGATCAAG 23935
Query 2698 GTTAACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAGCT 2757
|| ||||| || || || || |||||||||| ||||| |||||||| ||| |
Sbjct 23936 CCAAATCAAATAGGGACGTTAACAGAAACTTTTGCTGCTATTGAAATGGCAAAATCAAAC 23995
Query 2758 GGATACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGAT 2817
|||| ||| || | || ||||| ||||||||||| ||||| ||||||| || ||
Sbjct 23996 AACTACAAAGCTGTTATTTCTCACCGCTCAGGTGAAACAGAAGACACAACAATATCTCAT 24055
Query 2818 ATTGCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGT 2877
|| ||||||||| | || || || || || || || || | || ||| |||| |
Sbjct 24056 ATAGCAGTTGCATCAAATTGCGGGCAGATAAAAACCGGGTCGCTATCGCGTTCTGATAGG 24115
Query 2878 ATTGCTAAATACAA 2891
|||| || || ||
Sbjct 24116 CTTGCAAAGTATAA 24129
>seq1
Length=1655743
Score = 104 bits (114), Expect = 7e-18
Identities = 273/417 (65%), Gaps = 0/417 (0%)
Strand=Plus/Plus
Query 2521 TACCCAATCATCACTATCGAAGATGGTATGGACGAAAACGACTGGGACGGTTGGAAATCT 2580
|| || |||||| | ||||||||||| | ||| | ||||||||||| ||||||
Sbjct 360971 TATCCGATCATCTCGATCGAAGATGGCTGTGCCGAGGATGACTGGGACGGCTGGAAACTG 361030
Query 2581 CTTACTGAACGTCTTGGTGGTAAAGTTCAATTGGTTGGTGACGACTTCTTCGTAACTAAC 2640
|| || || ||||| || || ||| |||| || |||||| ||||||| || |||
Sbjct 361031 CTGACCGAGGCGCTTGGCAACAAGGTGCAACTGGTGGGCGACGACCTCTTCGTCACCAAC 361090
Query 2641 ACTGCTTACCTTGAAAAAGGTATTGCAGAACACGCTGCTAACTCAATCCTTATCAAAGTT 2700
| || | ||||||| || | || || ||||| || || |||| ||
Sbjct 361091 CCGCGCCGTCTGGCCGAAGGTATCGCCAAGGGCGTGGCGAACTCGATGCTGGTCAAGGTG 361150
Query 2701 AACCAAATCGGTACTTTGACTGAAACTTTTGACGCTATCGAAATGGCGAAAGAAGCTGGA 2760
||||| ||||| | |||| || || | | || |||| |||||| | || |
Sbjct 361151 AACCAGATCGGCTCGCTGACCGAGACGCTGCAAGCCGTCGATATGGCGCATCGCGCGCGC 361210
Query 2761 TACACAGCAGTAGTATCACACCGTTCAGGTGAAACTGAAGATTCAACAATCGCTGATATT 2820
||||| || | || |||||||| || ||||| || || || ||||| || |
Sbjct 361211 TACACCAACGTCATGTCGCACCGTTCGGGCGAAACCGAGGACAGCACCATCGCCGACCTC 361270
Query 2821 GCAGTTGCAACTAACGCTGGTCAAATTAAGACAGGTTCATTGTCACGTACTGACCGTATT 2880
|| || || || ||| || || || ||||| || | |||| | ||||| |
Sbjct 361271 GCCGTGGCCACCAACTGCGGCCAGATCAAGACCGGCAGCCTCGCACGGTCGGACCGGCTG 361330
Query 2881 GCTAAATACAACCAATTGCTTCGTATCGAAGACCAACTTGGTGAAGTTGCAGAATAC 2937
|| ||||||||||| || | || ||||| || || || ||||| || ||||||
Sbjct 361331 GCGAAATACAACCAGCTGATCCGCATCGAGGAAATGCTGGGCGAAGTCGCCGAATAC 361387
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 155704430622384
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |