Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_029107.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq14312 102 2e-17 >seq14312 Length=42616 Score = 102 bits (112), Expect = 2e-17 Identities = 163/225 (72%), Gaps = 8/225 (4%) Strand=Plus/Minus Query 31086 GACGACGGCGGTGGCCGCATGACCAGTAACGCCGTGGTCGACGG-GCTGTCCAACAACGT 31144 ||||||||||| || ||| ||| | ||||||||||| ||||| | ||| |||||||| Sbjct 9046 GACGACGGCGGCGGTCGCGCCACCGGCAACGCCGTGGTGGACGGTGAAGTC-AACAACGT 8988 Query 31145 GTTCCCGGACAT-ATCGGAGCTGGACCGCACGTACGGCCGCGTGGCGCTGCGCAAAGCGT 31203 |||||| ||||| | | | || ||||| || ||||||| | |||||||| || Sbjct 8987 GTTCCCCGACATCAGCCG-TCTCGACCGTACCACCGGCCGCATCAACCTGCGCAAGCTGT 8929 Query 31204 ATG--CGGCCATCGACACCAGCAACACCGACAGCTATTTCGGGGTGCAGGCCATCGTGGC 31261 | |||| |||| ||| || ||||| ||| | || | ||| ||||| || | Sbjct 8928 TCGGTGGGCCGATGACA-CAG-AATGCCGACGCCTACCTGGGCGCGCATGCCATTGTCAC 8871 Query 31262 CGAGGCGCCGGCCGATCCGCGCGTCACCATGGCGCTGTTCAGCAC 31306 | |||||||||| ||||||||||||| | || | |||||| ||| Sbjct 8870 CAAGGCGCCGGCAGATCCGCGCGTCAGCGTGCTGATGTTCAACAC 8826 Score = 96.9 bits (106), Expect = 9e-16 Identities = 100/131 (76%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 33771 TACAACGCCGTCGCCTACACGTACCTGCCGCTGTCGGCCGATGTGCTGGGCCTGGACCCT 33830 ||||||||||| | | ||| ||||||||| |||| ||||||| || ||||| Sbjct 6442 TACAACGCCGTTGTGCAAACGCGCCTGCCGCTCGATGCCGGCCTGCTGGGTCTTGACCCG 6383 Query 33831 GTCCGCCTGCCTGGCGATGGTCGCGTGCCGATCTACCGCAAGGGCGATGTGGTCGTCATC 33890 || |||||||| | |||||| ||||||||| | ||||| | ||||| ||| | || || Sbjct 6382 GTGCGCCTGCCGGCCGATGGCCGCGTGCCGGTGTACCGTGATGGCGACGTGCTGGTGATT 6323 Query 33891 CACCACACCGC 33901 ||||||||||| Sbjct 6322 CACCACACCGC 6312 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133802607693896