Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031264.1 Length=46877 Score E Sequences producing significant alignments: (Bits) Value seq22220 86.0 2e-12 >seq22220 Length=23789 Score = 86.0 bits (94), Expect = 2e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 27816 GAAACGTCTATAGCGAATACCTCGACAGGATCAGGCCCGAAATGTGGATGGGTGATTGTC 27875 || |||| || ||||| ||||| | ||| | |||||||| |||||||||||||| Sbjct 2679 GACACGTTGATGGCGAACACCTCAATAGGCTGGTCGCCGAAATGCGGATGGGTGATTGTG 2738 Query 27876 TTGCGGGTGAAGCCACGCCACGGAAGCTCCAAGCGGCGTTCGGCGTCGTCGCGCTTCGGA 27935 | | | | || ||||| || || ||| ||| || |||||||||||||||||||| Sbjct 2739 GTCAGTCGGTACCCGCGCCAGGGCAGTACCAGGCGCCGATCGGCGTCGTCGCGCTTCGGG 2798 Query 27936 TAGCCTCTGGCCAGCACAATGCCGTCA 27962 ||||| | | |||| | || | |||| Sbjct 2799 TAGCCGCGCGTCAGCTCGATACGGTCA 2825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149564001187848