Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq4656 91.5 2e-13 seq1973 86.0 8e-12 >seq4656 Length=104629 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/74 (88%), Gaps = 2/74 (3%) Strand=Plus/Minus Query 19331 GGGGAATTAGCTCAACGG--TAGAGCACCTGCTTTGCAAGCAGGGGGTTATCGGTTCGAA 19388 |||||||||||||| | | |||||||||||| ||||| ||||||||| | ||||||||| Sbjct 93667 GGGGAATTAGCTCAGCTGGCTAGAGCACCTGCCTTGCACGCAGGGGGTCAACGGTTCGAA 93608 Query 19389 TCCGATATTCTCCA 19402 |||| ||||||||| Sbjct 93607 TCCGTTATTCTCCA 93594 >seq1973 Length=162522 Score = 86.0 bits (94), Expect = 8e-12 Identities = 75/92 (82%), Gaps = 5/92 (5%) Strand=Plus/Minus Query 165730 CAATGGAAGAGTGGCAGAGTGGTTGATTGCATCAGTCTTGAAAACTGAC----GTGTTAG 165785 || |||||| ||||||||| |||| | |||| | ||||||||||| ||| |||| || Sbjct 4921 CATTGGAAGCGTGGCAGAGCGGTTTAATGCACCGGTCTTGAAAACCGACGAGGGTGTGAG 4862 Query 165786 TAGCACCGTGAGTTCGAATCTCACCTCTTCCG 165817 | | |||||||||||||||||||| |||||| Sbjct 4861 T-CCTCCGTGAGTTCGAATCTCACCGCTTCCG 4831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632651449464000