Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nephila_20clavipes_20[genbank_20GCA_5F002102615.1_202017-04-20] 180,236 sequences; 2,439,301,466 total letters Query= NC_031918.1 Length=45342 Score E Sequences producing significant alignments: (Bits) Value seq34866 158 3e-34 seq50 102 2e-17 >seq34866 Length=13211 Score = 158 bits (174), Expect = 3e-34 Identities = 248/350 (71%), Gaps = 10/350 (3%) Strand=Plus/Plus Query 33579 ACCGCCAATCATTTGCATCACACCACCCATTTGCTGGATAACAATTTCTGTGGTGTATTT 33638 |||||| | ||||||||| ||| ||||| | || | || |||||||| |||||||| Sbjct 5611 ACCGCCTAACATTTGCATTTGACCGCCCATGT-CT--ACCACGATTTCTGTAGTGTATTT 5667 Query 33639 TTCAACTCCAGCATTATCAGTCCATTTTCTAGTGCGCAACTGACCTTCAAAATAAACTTG 33698 ||| || | | |||||||||||| | || | || ||||||| | || ||||| Sbjct 5668 TTCTTGGCCTGATTGATCAGTCCATTTACGCGTTTGTAAACGACCTTCGATGTACACTTG 5727 Query 33699 TGAGCCTTTCCTAAGATACTCACCAGCAATTTCAGCGAGCTTGCCAAAGATAACTACGCG 33758 ||| ||||| | ||| || |||||||||| ||| || || |||||||| | || || || Sbjct 5728 TGAACCTTTACGAAGGTATTCACCAGCAACTTCTGCTAGTTTGCCAAATAACACGACACG 5787 Query 33759 GTGCCATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCTTATCATTCCATGATTCCGATGT 33818 |||||||||||| |||| | | | || || ||||| ||||| || | || Sbjct 5788 GTGCCATTCAGTACGCTCTTGCATTTGCCCTGTGTTTTTATCTTTCCAGCTATCTGTCGT 5847 Query 33819 AGCAA--CAGATACGTTGGCAACAGCGCCGCCATTTGGCATGTATCGCACTTCTGGGTCC 33876 ||||| | |||| || || || | |||||| ||||| || || |||||||| || Sbjct 5848 AGCAATGCTGATA--TTCGCTACGCCATTGCCATTAGGCATATAACGTACTTCTGGATCT 5905 Query 33877 TGGCCTAATGTGCCGAGGATGATTACTTTATTTACGCCGCGAGTTGCCAT 33926 |||||||| | || | | ||| ||||| || || ||||| |||||| Sbjct 5906 TGGCCTAAATTACCAACCAAGATAACTTTGTTCACACCGCG---TGCCAT 5952 >seq50 Length=481860 Score = 102 bits (112), Expect = 2e-17 Identities = 145/202 (72%), Gaps = 4/202 (2%) Strand=Plus/Minus Query 33682 CCTTCAAAATAAACTTGTGAGCCTTTCCTAAGATACTCACCAGCAATTTCAGCGAGCT-- 33739 ||||| | ||| || | |||||||| | ||||| || || |||||||| || || Sbjct 154891 CCTTCGATATACACCTTAGAGCCTTTACGCAGATATTCGCCGGCAATTTCTGCCAGACGC 154832 Query 33740 TGCCAAAGATAACTACGCGGTGCCATTCAGTTTGCTCCTTTTTCTCACCAGTAGCCTTAT 33799 || ||| | || || ||||||||||| |||||||| || | || || ||||| |||| Sbjct 154831 TGGTAAA--TTACGACCCGGTGCCATTCGGTTTGCTCTTTCATTTCGCCGGTAGCTTTAT 154774 Query 33800 CATTCCATGATTCCGATGTAGCAACAGATACGTTGGCAACAGCGCCGCCATTTGGCATGT 33859 | ||||| ||| || || |||| | ||| || || |||||||| | ||||| | Sbjct 154773 CTTTCCAGCTTTCAGAGGTCGCAATGCTCAGGTTAGCGACGGCGCCGCCCTGCGGCATAT 154714 Query 33860 ATCGCACTTCTGGGTCCTGGCC 33881 | || ||||| || |||||||| Sbjct 154713 AACGGACTTCCGGATCCTGGCC 154692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 144662514353728