Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq355719 298 1e-78 >seq355719 Length=284 Score = 298 bits (330), Expect = 1e-78 Identities = 238/280 (85%), Gaps = 6/280 (2%) Strand=Plus/Plus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| |||||| ||||||| || ||||||||||| ||||| ||||||||||| ||| Sbjct 1 CTTTACAACCCGAAGGCCTTCTT-CATACACGCGGCAT-GGCTGCATCAGGCTTTCCCCC 58 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 59 ATTGTGCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 118 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||| ||||||||||||||||| || ||||||||||| |||||||||||||| || Sbjct 119 TGTGGCTGGTCATCCTCTCAGACCAGCTAGAGATCGTCGCCTAGGTGAGCCATTACCCCA 178 Query 181 CCAACTAGCTAATCCGACCTAGGCTCATCTGATAGCGCAAGGCCCGAAGGTCCCCTGCTT 240 || |||||||||||| | | || ||||| || | | |||||||| ||||| |||| Sbjct 179 CCTACTAGCTAATCCCATATGGGTTCATCAAATGGTACGTGGCCCGAAAGTCCCACGCTT 238 Query 241 T-CTCCCGTAGGAC-GTATGCGGTATTAGCGTCCGTTTCC 278 | || || ||| |||||||||||||| ||||||| Sbjct 239 TGGTCTCG--CGACATTATGCGGTATTAGCAGTCGTTTCC 276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068186456480