Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq215 410 4e-112 seq355558 327 3e-87 >seq215 Length=8323 Score = 410 bits (454), Expect = 4e-112 Identities = 411/529 (78%), Gaps = 26/529 (5%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACC 59 ||||||||||| ||||| || || | |||||| || ||||| ||||| | ||||||||| Sbjct 1237 GTACTCATTCCGATTACGAGGCCTCGAAAGAGTCCCGTATCGTTATTTTTCGTCACTACC 1178 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1177 TCCCCGTGCCGGGAGTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 1118 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 ||||||||||||||||||||||||||||||| |||||||||||||||| |||||||| Sbjct 1117 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTGATTCCCCGTTACCCGTGACAACCATGGT 1058 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGC 239 || | | ||||||||||||||||||| |||||| ||||||| || | ||||||| Sbjct 1057 AGTCGCAGAAACTACCATCGAAAGTTGATAAGGCAGACATTTGAAAGATGCGTCGCCGGT 998 Query 240 TCAAGGCCATGCGATTCG-TTAAGTTATTATGAATCACC------AAGGA-----GCCCC 287 | | || |||||| | ||||||| || ||| | || || | | | Sbjct 997 ACTTGACCGTGCGATCGGCAAAAGTTATCCAGATTCATCAAAATTAACGACTTCGGACGC 938 Query 288 GAAG------GGCGTTGGTTTTTTATCTAATAAATACAC----CCCTTCCGAAGTCGGGG 337 |||| | || | | |||| |||||||||| ||| ||| || ||| | | Sbjct 937 GAAGCCCTCCGTCGATTGGTTTTGATCTAATAAAAGCACTCATCCCATCACTGGTCAGAG 878 Query 338 TTTT--TAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATC 395 || | | |||||||||||||||||||||||||| |||||||| ||| ||| ||| Sbjct 877 TTCTGATTGCATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACTGAGTAAGATC 818 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATAC 455 || ||| | ||||||| || |||||||||||| || || | || | | |||| || Sbjct 817 TAAGGAACCAAAACTGATATATTGAGCCATTCGCGGTATCGCCTTA-ATACGGCTTGCAC 759 Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 | ||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 758 TGAGACATGCATGGCTTAATCTTTGAGACAAGCATATAACTACTGGCAG 710 >seq355558 Length=277 Score = 327 bits (362), Expect = 3e-87 Identities = 239/282 (85%), Gaps = 5/282 (2%) Strand=Plus/Plus Query 195 CATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGAT 254 |||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||| Sbjct 1 CATCGAAAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCGGCACAAGGCCATGCGAT 60 Query 255 TCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAA 314 ||| |||||||||||| ||||||| | |||| | | | |||||||| ||||||||| Sbjct 61 TCGAGAAGTTATTATGATTCACCAAA---CTCCGAGGAG-GATGGTTTTT-ATCTAATAA 115 Query 315 ATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTA 374 ||||||||||||||||| ||||||||||||||||||| Sbjct 116 ATACACCCCTTCCGAAGNNNNNNNNNNNNNNNNNNNNNNNNTCTAGAATTACCACGGTTA 175 Query 375 TCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTT 434 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 176 TCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTT 235 Query 435 CACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATC 476 ||| ||||| ||||||||||||||||||||||||||||||| Sbjct 236 CACAGTATAATTTGCTTATACTTAGACATGCATGGCTTAATC 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1505026887936