Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neruda_20aoede_20[genbank_20GCA_5F900068225.1_202017-04-25] 355,741 sequences; 337,370,441 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq7548 181 8e-41 seq49004 123 2e-23 seq52122 111 1e-19 >seq7548 Length=2633 Score = 181 bits (200), Expect = 8e-41 Identities = 1133/1805 (63%), Gaps = 50/1805 (3%) Strand=Plus/Minus Query 65078 TCGACCGTGAACTGGATCGCATTAGCAGCCGCCTTGGTCC-TAAGATAGTACATGCCGGT 65136 || || |||||||| || ||||| || |||| || || | |||| |||||||| || || Sbjct 2245 TCTACGGTGAACTGTATAGCATTTGCTGCCGGTTTTGTGCGTAAG-TAGTACATTCCTGT 2187 Query 65137 CTTGAGGCCAGCACGCCAAGCATAGAAATGCATCGATGATAATTTTGCATAATTCGGCTC 65196 || | ||| |||||| | |||||| ||||| | || ||| |||| || |||| Sbjct 2186 TTTTAAGCCCATTTTCCAAGCGTGGAAATGAATCGACGTTAGTTTCCCATAGTTAGGCTT 2127 Query 65197 GGCCACATGCATATTCAACGACTGACTCTGATCGATGTAACGACCACGATCTGCAGCCAT 65256 || ||||| || || || || ||||| || || ||| || || | ||| || ||||| Sbjct 2126 AGCAACATGTATGTTAAAAGATTGACTTTGGTCTATGAAAGCTCCTCTATCAGCCGCCAT 2067 Query 65257 GTCAATGATACGACGTCCC-GATATCTCCCAGACGGTCTTGTACAGGCGACGTACCTCAA 65315 | ||| ||| || || |||||||| ||||| ||||||| | || || Sbjct 2066 TTGTATGG-ACGTTTTCAATGAAATCTCCCATACGGTTTTGTACAAATCTCTTATTTCTT 2008 Query 65316 TTGGAATCTCCTCAATGTCCTGGACTGAACCAC-GACGTGCAATAATGCGATTACGCATC 65374 | ||||| | ||||| || || | || || | || || ||| |||| ||| Sbjct 2007 TAGGAATTTTTTCAATTTCTTGTATAGATCCGTTGTTGTATAA-AATAAGATTTTTCATA 1949 Query 65375 GACTCTGACCACAAACCCAAATCGATAAGATGTTGAACCAAGTGACGATTGATGACTTGG 65434 || ||| ||| | | | | || | | | |||| |||| | || | Sbjct 1948 TCTTCATCCCATAAATCGGCTCTGGTCAAATCTGTCAGAAGGTGATGATTCACTACAGGA 1889 Query 65435 AACTCGCCGGACAGTACACGACGGACATAGATGTTGGACGTGATGGGTTCAAAGGATTCA 65494 || || || || | || | | || ||||| || || | ||||||||| || ||| Sbjct 1888 AATTCTCCAGATAAGACTCTTCTTTGGTAAATGTTTGATGTAAAGGGTTCAAAAGACTCA 1829 Query 65495 GTGTTGCCTAGAATTTGGGCAGTAGATGCAGTTGGCATGGGAGCGACCAACAATGAGTTT 65554 ||||| || |||||||| || ||||| || |||||||| ||||| | ||| | || || Sbjct 1828 GTGTTACCAAGAATTTGTGCTGTAGAGGCGGTTGGCATAGGAGCTAACAATAGAGAATTG 1769 Query 65555 CGCAATCCGTTCATTTCAATGTTGTGACGCAATTCGTCCCAGTTCCACATCGGTTTATCG 65614 ||||| || | || | || || | | | |||||| ||||| ||| || Sbjct 1768 CGCAAACCATGTTTTGCTATTTTTTCTTTGAGGGCAGCCCAGTCCCACA---GTTC--CG 1714 Query 65615 TCGACATCCACGGGCCACATATCCTGTTGCAGGGTTCCGATACTGGCCGGTGAACCGAGG 65674 | | | | ||||||||| | ||| ||| | || || | || || Sbjct 1713 TAGGAGTTTT-GTCCCACATATCATATTGTAGGATACCTTGGCTCACTGGACTCCCTTCA 1655 Query 65675 AAACTATCGTACACTCCCTCCTCCTTGGCAAGTTGACAGCTGGTCTCGAGTGCGGCAAAA 65734 || || ||| | || || | | || | || ||| || | || | ||| || || Sbjct 1654 TAAGTACTGTATGCACCTTCTTTTTCTGCTAATTCACAACTAGCTTCTAATGCACCATAA 1595 Query 65735 TAAATGGTCTCGAAAATGCGTCGATTAAGTTCACGTGCCTCATCGCTCTCGTACGGCATA 65794 ||||| || || || || || ||||||| ||| | || || ||||| || || Sbjct 1594 TAAATAGTTTCAAATATTTGTTGATTAAGGAGTATTGCTTTCTCACTTTCGTAAGGTATT 1535 Query 65795 CCCATCAGGACAAAAGTGTCGGCCAGACCTTGAACTCCAATACCGATGGGACGATGACGC 65854 | ||||| ||||| || || |||| || ||||| ||||||||||| || || || | Sbjct 1534 CTCATCAACACAAATGTATCTGCCATTCCCTGAACACCAATACCGATAGGCCGGTGCTTC 1475 Query 65855 AAATTGGAACGTCTCGCCTCAGGTACAGGGTAGTAATTGATATCGATAATGCGATTCAAA 65914 | ||| ||| | | || ||||| ||||| || | || | ||| || | || ||| Sbjct 1474 ATATTTGAAGTTTTTGCTTCAGGGACAGGATAAAAGTTAACATCAATGACTTTGTTTAAA 1415 Query 65915 TTGCGTGTCACCACATGCACGATACGTCGCAATTGTTCGAAATCAAAATGTTTAGGACGA 65974 || | || || | | ||| | |||| || |||| ||| || ||| | | Sbjct 1414 TTTTGAGTGACAATTTTTGTGATTTCTTTTAATTTTTTAAAATTAAATTGCTTATGTTCA 1355 Query 65975 TCGGGAGTGCCGGACACCACAAACTTGGGAAGGGCAAGAGATGCGAGGTTGCAGACAGCT 66034 |||||| || ||| || | || || || ||||| || || Sbjct 1354 ------------------ACAAACATGTTAAGTGCTATGGAAGCAAGATTGCATACTGCC 1313 Query 66035 ATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTG 66094 | || || | || || | |||| || ||||| ||||| || || || ||| Sbjct 1312 ACTTCATCTTCTGAAGTGTATTGCACAACCTCAGTGCAAAGATTGCTACATTTAATAGTG 1253 Query 66095 CCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTG 66154 || | ||||| |||||||||||| | || || |||||||| |||| |||||| || || Sbjct 1252 CCAAGATTCTTTTGATTACTCTTCCTGTTACAAGCATCCTTATACAACATGTATGGTGTA 1193 Query 66155 CCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAA------GAGCGCGTGCCTTCACC 66208 || ||||| ||||||| || || || | | ||| | |||| | || ||| Sbjct 1192 CCAGTCTCCACTTGGGCTTCTATAATTGACTTCCATAACTCTTGAGCTC-TGACTT-GTT 1135 Query 66209 GTACGTACCGCCCTACCTTTGCGTTCGTAATGTTCGTAGAGGTGTTCGAAGGATTCACCC 66268 || | || | | || ||| || | | || || | ||| || | | | | Sbjct 1134 TTATAAATCGTTTTTCTTT----TTCATATTTGGCATATAGTTCTTCAAA--CTCCTCTC 1081 Query 66269 CATA--CTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCT 66326 |||| || | |||| ||||| | || |||||||| || |||| | |||||| Sbjct 1080 CATAGCAGTCAGCGAGACCAGGACAGTCATGAGGACACATTAGACTCCAAACTTCATCCT 1021 Query 66327 GTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTC 66386 |||||| | |||||| ||||| |||||||| | || || || || || | |||| Sbjct 1020 TTTCTACTCTTTTCATAAACAGATCTGGTATCCATAAAGCATAAAACAGTTCTCTAGCTC 961 Query 66387 GTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGC 66445 || || | || ||| || || | || || | ||||||||| ||||| |||||| Sbjct 960 TCATTTCTTCCTTACCTGTG-TTCTTCCTTAAATCTAAGAACTCAAATATGTCTGCATGC 902 Query 66446 CATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAG 66505 || || || | ||| || || || | || ||||||| |||||||| || || || Sbjct 901 CAAGGCTCTAAGTAAATTGCAAATGCACCGGGACGTTTGTTTCCACCTTGATCTACATAT 842 Query 66506 CGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTG 66565 | || |||||| | || | |||||| || || || || || || ||||| ||| Sbjct 841 CTGGCAGTATTGTTATACACTCTCAACATTGGCACTAGACCATTTGAGACCCCATTAGTG 782 Query 66566 CCGTCGATGGGGGATCCTCGTGCCCGTATATCGTGAACATTCAGACCAATACCACCGGCC 66625 || | || || || | || | || || || | ||| || ||||| || Sbjct 781 CCAGCTATATAAGAACCCTGGGCTCTGATGCAATGTGTATGTAAACCTATGCCACCAGCA 722 Query 66626 GTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCC 66685 | || || || |||||| | | || || ||||| |||||| || | Sbjct 721 GATTTAGAAATTAAAGCACATTGTTTTAAAGTATCAAAAATGCCTTCAATGCTATCGTCT 662 Query 66686 TTGATGGTCAGGAGGTAGCATGAACTAAGTTGGGGTTTGGGTGTGGCGGCCGAGAAGAGG 66745 || || | | ||| |||| || ||| || || ||||| || || ||||| || Sbjct 661 TTCATAGCTATAAGGAAGCAGGAGGAAAGCTGTGGCCGCGGTGTAGCTGCTGAGAACAGT 602 Query 66746 GTGGGTGTAGCGTGCGTAAAGTAATGGCGAGACATGTAATTGTACGTCTCGATGACAGCA 66805 || || | || || ||||| || | ||||| ||| || || | ||| || | Sbjct 601 GTAGGGCTTGCATGTGTAAAATATTTCTCTGACATCATATTATAAGTATTGATTGCACTA 542 Query 66806 TCAATGTTTTCGCCATGAATCCCGAGTGCACA-TCGCATCAGGAGGTATTGAGGCCGTTC 66864 ||||||| ||| || ||||| || | || | | || ||| || | || |||||| | ||| Sbjct 541 TCAATGTCTTCACCGTGAATGCCTA-TGGAGACTCTCATTAGCATGTGTTGAGGTCTTTC 483 Query 66865 GACCA 66869 |||| Sbjct 482 AACCA 478 >seq49004 Length=3997 Score = 123 bits (136), Expect = 2e-23 Identities = 149/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 61396 TTGTTCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAAT 61455 ||||||||||| || ||||| ||||| || ||| ||| || || ||||| || | Sbjct 89 TTGTTCAATGCTATTGAGACTCTACCGTGTGTTAAGAAGAAGGCAGACTGGGCATTGCAG 148 Query 61456 TGGATCACCAGTACAACGGCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAG 61515 ||||| || | ||||| ||||||| ||||| | | || ||||||| ||| ||| Sbjct 149 TGGATTGGTAGCAAGACGGCCACATTTGCAGAACGTATAATCGCTTTTGCGGCGGTTGAG 208 Query 61516 GGTGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATG 61575 || |||||||| || ||||| |||| ||||||||||| ||||| || || ||| Sbjct 209 GGAATATTTTTCTCGGGCAGCTTTGCTTCAATATTTTGGTTGAAAAAACGAGGTCTGATG 268 Query 61576 CCCGGTCTGACCTTCAGCAATGA 61598 ||||| |||| ||||||||||| Sbjct 269 CCCGGATTGACTTTCAGCAATGA 291 >seq52122 Length=5755 Score = 111 bits (122), Expect = 1e-19 Identities = 117/154 (76%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 61184 GTGAACAACATTTCATTAAACATGTGTTGGCGTTCTTTGCCGCTTCGGACGGTATCGTCA 61243 |||| ||||||| || || ||||| || || ||||| || ||||| || ||||| || | Sbjct 5602 GTGAGAAACATTTTATCAAGCATGTCTTAGCATTCTTCGCAGCTTCTGATGGTATTGTTA 5661 Query 61244 ATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCT 61303 ||||||| || |||| || ||| | || ||||| |||||| | || || | || || | Sbjct 5662 ATGAGAACTTGGTGGAGCGGTTCTCACAAGAGGTTCAAGTGACCGAAGCCAGGTGCTTTT 5721 Query 61304 ACGGCTTCCAGATTGCCATGGAGAATGTCCACTC 61337 | || || || ||||||||||| |||||||| || Sbjct 5722 ATGGTTTTCAAATTGCCATGGAAAATGTCCATTC 5755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395844306788240