Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nicrophorus_20vespilloides_20[refseq_20GCF_5F001412225.1_202015-10- 23] 4,650 sequences; 195,273,382 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq891 324 2e-86 seq4492 286 6e-75 seq4493 136 7e-30 seq3992 134 2e-29 >seq891 Length=1269 Score = 324 bits (358), Expect = 2e-86 Identities = 231/263 (88%), Gaps = 8/263 (3%) Strand=Plus/Minus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 717 GTCAACAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 658 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 || | |||||||||||||||||||| ||||| |||||||| |||||||||||||||| Sbjct 657 GTTGGAGGGTGAACAATCCAACGCTTTACGAATACTGCTTCGAAATGATAGGAAGAGCCG 598 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 597 ACATCGAAGGATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATC 538 Query 210 CCTGTGGTAACTTTTCTGGCACCTC----TAGCCTCAAATTTCGAGGGACTAAAGGATCG 265 |||||||||||||||||| |||||| ||| || |||| | || ||||||||| Sbjct 537 CCTGTGGTAACTTTTCTGACACCTCTTATTAGAATC---TTTCTAATGA-AAAAGGATCG 482 Query 266 ATAGGCCACACTTTCATGGTTTG 288 ||||||| ||||| ||| || Sbjct 481 TGAGGCCACGCTTTCGCGGTCTG 459 >seq4492 Length=2735 Score = 286 bits (316), Expect = 6e-75 Identities = 207/237 (87%), Gaps = 7/237 (3%) Strand=Plus/Plus Query 50 AACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCA 109 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 419 AACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCA 478 Query 110 ACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGC 169 || ||| |||||||||||||| ||||||||||| ||||||| |||||||||||||||| Sbjct 479 ACACTTGGCGAATTCTGCTTCGCAATGATAGGAAGTGCCGACAACGAAGGATCAAAAAGC 538 Query 170 AACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT----CCCTGTGGTAACTTTTC 225 | ||||||||||||||||||| |||||||||||||||| ||||||||||||||||| Sbjct 539 GAAGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATGTTACCCTGTGGTAACTTTTC 598 Query 226 TGGCACCTCTAGCCTCAAATTTC--GAGGGACTAAAGGATCGATAGGCCACACTTTC 280 || ||||||| | || ||| || | | | |||||||||||||||| | ||||| Sbjct 599 TGACACCTCTTG-CTAAAAACTCATTAAAGCCAAAAGGATCGATAGGCCCCGCTTTC 654 >seq4493 Length=13253 Score = 136 bits (150), Expect = 7e-30 Identities = 106/124 (85%), Gaps = 3/124 (2%) Strand=Plus/Plus Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 ||||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||| Sbjct 5152 AGGATCAAAAAGCGACGTTGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGG 5211 Query 217 TAACTTTTCTGGCACCTCTAGCCTCAAATTTC--GAGGGACTAAAGGATCGATAGGCCAC 274 ||||||||||| ||||||| | || ||| || | | | |||||||||||||||| | Sbjct 5212 TAACTTTTCTGACACCTCTTG-CTAAAAACTCATTAAAGCCAAAAGGATCGATAGGCCCC 5270 Query 275 ACTT 278 ||| Sbjct 5271 GCTT 5274 >seq3992 Length=3808 Score = 134 bits (148), Expect = 2e-29 Identities = 153/206 (74%), Gaps = 27/206 (13%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60 ||||| |||| ||||| || || |||| | |||||||||||||||||||||||||||| Sbjct 3630 TACTAGGCGGGATTACTATCACGGTGACGTTTATCAGTAGGGTAAAACTAACCTGTCTCA 3689 Query 61 TGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGA 120 |||||||||||||||||||| | | ||| |||||| ||| ||| Sbjct 3690 CGACGGTCTAAACCCAGCTCAGGGAAC------GTG--------ATCCAATACTTGGCGA 3735 Query 121 ATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTAT 180 ||||||||||| |||||| |||| | | |||| |||||||||| |||||||||| Sbjct 3736 ATTCTGCTTCGCAATGATACAAAGATC---CTTCGA--TATCAAAAAGCGACGTCGCTAT 3790 Query 181 GAACGCTTGGCTGCCACAAGCCAGTT 206 |||| |||||||||||||| Sbjct 3791 GAAC--------GCCACAAGCCAGTT 3808 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854360270400