Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_007902.1 Length=52162 Score E Sequences producing significant alignments: (Bits) Value seq1173 405 2e-108 >seq1173 Length=295699 Score = 405 bits (448), Expect = 2e-108 Identities = 422/554 (76%), Gaps = 0/554 (0%) Strand=Plus/Minus Query 23588 TCCAGCATATCACGGGTACGAATGTGCTTCTGCACCAGTTCCAGCAGCGCCACCCGGCGA 23647 || |||||||| ||||| ||||| |||||| |||||| |||| ||| || || | ||| Sbjct 138996 TCTAGCATATCGCGGGTGCGAATATGCTTCATCACCAGCTCCATCAGGGCAACATGTCGA 138937 Query 23648 TGGGTCAGGATTTCGTCATCCGGTATTGCAGTGATATCGACCAGCGGAAATGCCTGATGA 23707 || || | || || |||||||| || || || | || ||||| ||||| ||||| | Sbjct 138936 TGTGTGACAATCTCCTCATCCGGGATGGCCGTCACGTCAACCAGAGGAAACGCCTGCATA 138877 Query 23708 TAAACCGTGGCCGCCAATTCTGGCTCAGCAAAACAGTCCAGACAGCGCGTGCTGTACGGA 23767 || || | |||| ||| || ||||||||||| |||||||| | || ||||| ||| Sbjct 138876 TAGACAGACTTTGCCAGTTCCGGATCAGCAAAACAATCCAGACAATGGGTACTGTAGGGA 138817 Query 23768 TACGGCGACGTGGTGCCGTGGTAAAACAGCAGCGGAATGACCACCGGTAGCTGATCGTTG 23827 |||||||| ||| | || || |||||||||||||| || ||||| || | |||||||||| Sbjct 138816 TACGGCGAAGTGTTACCTTGATAAAACAGCAGCGGGATCACCACTGGCAACTGATCGTTG 138757 Query 23828 CCCTGTTCTAGATGCCGCTGCATCGCGGCGACCGCATACCGTAGCAATCGAAACGCCATC 23887 ||||| || |||||||| |||||||| || |||||||| || | ||| ||||| |||||| Sbjct 138756 CCCTGCTCAAGATGCCGTTGCATCGCCGCCACCGCATAGCGCATCAAACGAAATGCCATC 138697 Query 23888 AGCTTTTCCGGGCGGCTCTGGTGCTCTATCAGACAGTAGACGTAACCATCATGGCCCGTC 23947 |||||||| |||| |||||||||||| || || || |||||||||| |||||| |||| Sbjct 138696 AGCTTTTCTGGGCTGCTCTGGTGCTCGATAAGGCAATAGACGTAACTATCATGACCCGCT 138637 Query 23948 GTGGTCTTCATCGAGTAGAGCATATCCGAGCACTGGCCCTTCAGGTCGTCTTCGATAAAT 24007 |||||||||||||| |||||||||||||| ||||||| |||||| || ||||| Sbjct 138636 GTGGTCTTCATCGAATAGAGCATATCCGAACACTGGCTACGCAGGTCTGGCTCAATAAAG 138577 Query 24008 GAGCCGGAAGCCATCGCCAATGTGCCGAAATCGCAGCGCTTACGCAGGTGCGGCGGCAGA 24067 ||||| ||||||||| || | ||||| || | ||| || | ||| | | Sbjct 138576 CTTCCGGACTCCATCGCCAGCGTACTAAAATCACACAATTGACGAAGTTTTTCCGGTAAA 138517 Query 24068 TGGATTTCCAGAAAGTCCCGAGCGACCGCGATATCGCCAAGGAACTTTTTGAATACGTGG 24127 || |||| |||||| |||| |||| | |||||| |||||||| || || || | | Sbjct 138516 TGAATTTGCAGAAAATCCCTTGCGATGGTGATATCACCAAGGAATTTCTTAAACAGACTG 138457 Query 24128 TCATGGTGCGACAG 24141 |||||||| || || Sbjct 138456 TCATGGTGGGAAAG 138443 Score = 289 bits (320), Expect = 9e-74 Identities = 399/555 (72%), Gaps = 5/555 (1%) Strand=Plus/Plus Query 23588 TCCAGCATATCACGGGTACGAATGTGCTTCTGCACCAGTTCCAGCAGCGCCACCCGGCGA 23647 || |||||||||||||| || || |||||| ||| || |||| |||||| || | ||| Sbjct 14676 TCTAGCATATCACGGGTGCGGATATGCTTCATCACAAGCTCCATCAGCGCAACATGCCGA 14735 Query 23648 TGGGTCAGGATTTCGTCATCCGGTATTGCAGTGATATCGACCAGCGGAAATGCCTGATGA 23707 || || | || || || || || || | || | || ||||| || || | ||| | Sbjct 14736 TGCGTGACAATCTCCTCGTCAGGGATAACCGTCACGTCAACCAGTGGGAACGTCTGCATA 14795 Query 23708 TAAACCGTGGCCGCCAATTCTGGCTCAGCAAAACAGTCCAGACAGCGCGTGCTGTACGGA 23767 || || | |||| |||||| ||| |||| || |||| || | |||||||| ||| Sbjct 14796 TAGACAGACTTTGCCAGTTCTGGATCACCAAAGCAATCCAACCATTGGGTGCTGTAGGGA 14855 Query 23768 TACGGCGACGTGGTGCCGTGGTAAAACAGCAGCGGAATGACCACCGGT-AGCTGATCGTT 23826 |||||||| || | || || |||||||||| ||| || | ||| ||| || || || || Sbjct 14856 TACGGCGAGGTTTTACCCTGATAAAACAGCAACGGTATTAACACGGGTAAGGTG-TCATT 14914 Query 23827 GCCCTGTTCTAGATGCCGCTGCATCGCGGCGACCGCATACCGTAGCAATCGAAACGCCAT 23886 |||||| || ||||| |||||||| ||||| |||||||| | ||| | | |||||||| Sbjct 14915 GCCCTGCTCAAGATGGCGCTGCATGGCGGCAACCGCATATCTTAGAAGCCTGAACGCCAT 14974 Query 23887 CAGCTTTTCCGGGCGGCTCTGGTGCTCTATCAGACAGTAGACGTAACCATCATGGCCCGT 23946 || ||||||||| | |||||| ||||| | | ||| |||| ||||| | | ||||| Sbjct 14975 CATCTTTTCCGGTCTGCTCTGATGCTCCAATAAACAATAGATGTAAC---CCCGTCCCGT 15031 Query 23947 CGTGGTCTTCATCGAGTAGAGCATATCCGAGCACTGGCCCTTCAGGTCGTCTTCGATAAA 24006 || || | || || |||||||||||||||||||||| |||||| || ||||| Sbjct 15032 TGTCGTTTGCACAGAATAGAGCATATCCGAGCACTGGCTACGCAGGTCTGGCTCAATAAA 15091 Query 24007 TGAGCCGGAAGCCATCGCCAATGTGCCGAAATCGCAGCGCTTACGCAGGTGCGGCGGCAG 24066 |||||| ||||||||| ||| | ||||| || | ||| || | || | Sbjct 15092 GCTGCCGGACTCCATCGCCAGTGTACTAAAATCACACAATTGACGAAGTTTTTCAGGTAA 15151 Query 24067 ATGGATTTCCAGAAAGTCCCGAGCGACCGCGATATCGCCAAGGAACTTTTTGAATACGTG 24126 ||| |||| ||||||||||| || | || |||||| || ||||| || || || | | Sbjct 15152 ATGAATTTTCAGAAAGTCCCTTGCAATCGTGATATCACCGAGGAATTTCTTAAACAGGCT 15211 Query 24127 GTCATGGTGCGACAG 24141 ||| ||||| || || Sbjct 15212 GTCGTGGTGGGATAG 15226 Score = 289 bits (320), Expect = 9e-74 Identities = 399/555 (72%), Gaps = 5/555 (1%) Strand=Plus/Plus Query 23588 TCCAGCATATCACGGGTACGAATGTGCTTCTGCACCAGTTCCAGCAGCGCCACCCGGCGA 23647 || |||||||||||||| || || |||||| ||| || |||| |||||| || | ||| Sbjct 25290 TCTAGCATATCACGGGTGCGGATATGCTTCATCACAAGCTCCATCAGCGCAACATGCCGA 25349 Query 23648 TGGGTCAGGATTTCGTCATCCGGTATTGCAGTGATATCGACCAGCGGAAATGCCTGATGA 23707 || || | || || || || || || | || | || ||||| || || | ||| | Sbjct 25350 TGCGTGACAATCTCCTCGTCAGGGATAACCGTCACGTCAACCAGTGGGAACGTCTGCATA 25409 Query 23708 TAAACCGTGGCCGCCAATTCTGGCTCAGCAAAACAGTCCAGACAGCGCGTGCTGTACGGA 23767 || || | |||| |||||| ||| |||| || |||| || | |||||||| ||| Sbjct 25410 TAGACAGACTTTGCCAGTTCTGGATCACCAAAGCAATCCAACCATTGGGTGCTGTAGGGA 25469 Query 23768 TACGGCGACGTGGTGCCGTGGTAAAACAGCAGCGGAATGACCACCGGT-AGCTGATCGTT 23826 |||||||| || | || || |||||||||| ||| || | ||| ||| || || || || Sbjct 25470 TACGGCGAGGTTTTACCCTGATAAAACAGCAACGGTATTAACACGGGTAAGGTG-TCATT 25528 Query 23827 GCCCTGTTCTAGATGCCGCTGCATCGCGGCGACCGCATACCGTAGCAATCGAAACGCCAT 23886 |||||| || ||||| |||||||| ||||| |||||||| | ||| | | |||||||| Sbjct 25529 GCCCTGCTCAAGATGGCGCTGCATGGCGGCAACCGCATATCTTAGAAGCCTGAACGCCAT 25588 Query 23887 CAGCTTTTCCGGGCGGCTCTGGTGCTCTATCAGACAGTAGACGTAACCATCATGGCCCGT 23946 || ||||||||| | |||||| ||||| | | ||| |||| ||||| | | ||||| Sbjct 25589 CATCTTTTCCGGTCTGCTCTGATGCTCCAATAAACAATAGATGTAAC---CCCGTCCCGT 25645 Query 23947 CGTGGTCTTCATCGAGTAGAGCATATCCGAGCACTGGCCCTTCAGGTCGTCTTCGATAAA 24006 || || | || || |||||||||||||||||||||| |||||| || ||||| Sbjct 25646 TGTCGTTTGCACAGAATAGAGCATATCCGAGCACTGGCTACGCAGGTCTGGCTCAATAAA 25705 Query 24007 TGAGCCGGAAGCCATCGCCAATGTGCCGAAATCGCAGCGCTTACGCAGGTGCGGCGGCAG 24066 |||||| ||||||||| ||| | ||||| || | ||| || | || | Sbjct 25706 GCTGCCGGACTCCATCGCCAGTGTACTAAAATCACACAATTGACGAAGTTTTTCAGGTAA 25765 Query 24067 ATGGATTTCCAGAAAGTCCCGAGCGACCGCGATATCGCCAAGGAACTTTTTGAATACGTG 24126 ||| |||| ||||||||||| || | || |||||| || ||||| || || || | | Sbjct 25766 ATGAATTTTCAGAAAGTCCCTTGCAATCGTGATATCACCGAGGAATTTCTTAAACAGGCT 25825 Query 24127 GTCATGGTGCGACAG 24141 ||| ||||| || || Sbjct 25826 GTCGTGGTGGGATAG 25840 Score = 289 bits (320), Expect = 9e-74 Identities = 399/555 (72%), Gaps = 5/555 (1%) Strand=Plus/Minus Query 23588 TCCAGCATATCACGGGTACGAATGTGCTTCTGCACCAGTTCCAGCAGCGCCACCCGGCGA 23647 || |||||||||||||| || || |||||| ||| || |||| |||||| || | ||| Sbjct 59722 TCTAGCATATCACGGGTGCGGATATGCTTCATCACAAGCTCCATCAGCGCAACATGCCGA 59663 Query 23648 TGGGTCAGGATTTCGTCATCCGGTATTGCAGTGATATCGACCAGCGGAAATGCCTGATGA 23707 || || | || || || || || || | || | || ||||| || || | ||| | Sbjct 59662 TGCGTGACAATCTCCTCGTCAGGGATAACCGTCACGTCAACCAGTGGGAACGTCTGCATA 59603 Query 23708 TAAACCGTGGCCGCCAATTCTGGCTCAGCAAAACAGTCCAGACAGCGCGTGCTGTACGGA 23767 || || | |||| |||||| ||| |||| || |||| || | |||||||| ||| Sbjct 59602 TAGACAGACTTTGCCAGTTCTGGATCACCAAAGCAATCCAACCATTGGGTGCTGTAGGGA 59543 Query 23768 TACGGCGACGTGGTGCCGTGGTAAAACAGCAGCGGAATGACCACCGGT-AGCTGATCGTT 23826 |||||||| || | || || |||||||||| ||| || | ||| ||| || || || || Sbjct 59542 TACGGCGAGGTTTTACCCTGATAAAACAGCAACGGTATTAACACGGGTAAGGTG-TCATT 59484 Query 23827 GCCCTGTTCTAGATGCCGCTGCATCGCGGCGACCGCATACCGTAGCAATCGAAACGCCAT 23886 |||||| || ||||| |||||||| ||||| |||||||| | ||| | | |||||||| Sbjct 59483 GCCCTGCTCAAGATGGCGCTGCATGGCGGCAACCGCATATCTTAGAAGCCTGAACGCCAT 59424 Query 23887 CAGCTTTTCCGGGCGGCTCTGGTGCTCTATCAGACAGTAGACGTAACCATCATGGCCCGT 23946 || ||||||||| | |||||| ||||| | | ||| |||| ||||| | | ||||| Sbjct 59423 CATCTTTTCCGGTCTGCTCTGATGCTCCAATAAACAATAGATGTAAC---CCCGTCCCGT 59367 Query 23947 CGTGGTCTTCATCGAGTAGAGCATATCCGAGCACTGGCCCTTCAGGTCGTCTTCGATAAA 24006 || || | || || |||||||||||||||||||||| |||||| || ||||| Sbjct 59366 TGTCGTTTGCACAGAATAGAGCATATCCGAGCACTGGCTACGCAGGTCTGGCTCAATAAA 59307 Query 24007 TGAGCCGGAAGCCATCGCCAATGTGCCGAAATCGCAGCGCTTACGCAGGTGCGGCGGCAG 24066 |||||| ||||||||| ||| | ||||| || | ||| || | || | Sbjct 59306 GCTGCCGGACTCCATCGCCAGTGTACTAAAATCACACAATTGACGAAGTTTTTCAGGTAA 59247 Query 24067 ATGGATTTCCAGAAAGTCCCGAGCGACCGCGATATCGCCAAGGAACTTTTTGAATACGTG 24126 ||| |||| ||||||||||| || | || |||||| || ||||| || || || | | Sbjct 59246 ATGAATTTTCAGAAAGTCCCTTGCAATCGTGATATCACCGAGGAATTTCTTAAACAGGCT 59187 Query 24127 GTCATGGTGCGACAG 24141 ||| ||||| || || Sbjct 59186 GTCGTGGTGGGATAG 59172 Score = 147 bits (162), Expect = 7e-31 Identities = 140/179 (78%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 28708 TTCATGCCGCACCTCCCGCTTTCAGAAGGGCCGCACGCTGGCGAACGGTAAGGTGTTTGG 28767 ||||| |||||||||| | ||||| | | ||||| ||| |||||| | ||| | Sbjct 86853 TTCATACCGCACCTCCGATACTACGAAGGTACTCGCGCTGACGATTGGTAAGATATTTTG 86794 Query 28768 ATTGGTGGGCAAAGCTCAAAAGCTGCCCGGTCGTGATGCTGCACGCTTTCAACAGCCGTG 28827 || ||| |||||||||||||||||| || | | |||| ||||||||||| | |||| Sbjct 86793 ATGTGTGAGCAAAGCTCAAAAGCTGCTCGATTGATATGCCGCACGCTTTCATTATGCGTG 86734 Query 28828 CGATATGCGTACTATTCCGCATAGCTCAACTCTTAGTCTACTTAGGTTTTGGGTTAGCT 28886 | |||||||||||||| ||||||||||||||| ||| | ||||| |||||||||||| Sbjct 86733 CAATATGCGTACTATTTCGCATAGCTCAACTCCTAGCGTTATTAGGGTTTGGGTTAGCT 86675 Score = 118 bits (130), Expect = 4e-22 Identities = 133/178 (75%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 48689 TCATGCGCCACCTCCCATGCTCAGGAGATAAGCACGTTGGCGAGGGGTCAAATGTCTGGA 48748 |||| | ||||||| || || | || || | || || ||| ||| | || | | || Sbjct 86852 TCATACCGCACCTCCGATACTACGAAGGTACTCGCGCTGACGATTGGTAAGATATTTTGA 86793 Query 48749 TTGGCGGGCAAAGCTCAAAAGCTGCCCGGTCGTGATCTTGCACGCTTTCAACAGCCGTGC 48808 | | | |||||||||||||||||| || | | || ||||||||||| | ||||| Sbjct 86792 TGTGTGAGCAAAGCTCAAAAGCTGCTCGATTGATATGCCGCACGCTTTCATTATGCGTGC 86733 Query 48809 GATATGCGTACTATTCCGCATAGCTCAACTCCTAGTCTACGTAGGTTTTGGGTTAGCT 48866 |||||||||||||| ||||||||||||||||||| | |||| |||||||||||| Sbjct 86732 AATATGCGTACTATTTCGCATAGCTCAACTCCTAGCGTTATTAGGGTTTGGGTTAGCT 86675 Score = 116 bits (128), Expect = 1e-21 Identities = 105/132 (80%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 28755 GTAAGGTGTTTGGATTGGTGGGCAAAGCTCAAAAGCTGCCCGGTCGTGATGCTGCACGCT 28814 ||||||| ||| ||| | | |||||||||||||||||| || | | |||| ||||||| Sbjct 146055 GTAAGGTATTTCGATGTGAGAGCAAAGCTCAAAAGCTGCTCGATTGATATGCCGCACGCT 146114 Query 28815 TTCAACAGCCGTGCGATATGCGTACTATTCCGCATAGCTCAACTCTTAGTCTACTTAGGT 28874 |||| | ||||| |||||||||||||| ||||||| | |||| ||| | ||||| Sbjct 146115 TTCATTATGCGTGCAATATGCGTACTATTTCGCATAGTCCGACTCCTAGCGTTATTAGGG 146174 Query 28875 TTTGGGTTAGCT 28886 |||||||||||| Sbjct 146175 TTTGGGTTAGCT 146186 Score = 96.9 bits (106), Expect = 1e-15 Identities = 88/111 (79%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 48756 GCAAAGCTCAAAAGCTGCCCGGTCGTGATCTTGCACGCTTTCAACAGCCGTGCGATATGC 48815 |||||||||||||||||| || | | || ||||||||||| | ||||| |||||| Sbjct 146076 GCAAAGCTCAAAAGCTGCTCGATTGATATGCCGCACGCTTTCATTATGCGTGCAATATGC 146135 Query 48816 GTACTATTCCGCATAGCTCAACTCCTAGTCTACGTAGGTTTTGGGTTAGCT 48866 |||||||| ||||||| | |||||||| | |||| |||||||||||| Sbjct 146136 GTACTATTTCGCATAGTCCGACTCCTAGCGTTATTAGGGTTTGGGTTAGCT 146186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 166704582010704