Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24]
46,558 sequences; 1,140,786,310 total letters
Query= NC_031108.1
Length=39640
Score E
Sequences producing significant alignments: (Bits) Value
seq6398 733 0.0
>seq6398
Length=11417
Score = 733 bits (812), Expect = 0.0
Identities = 1033/1435 (72%), Gaps = 54/1435 (4%)
Strand=Plus/Plus
Query 8851 GGGTCTGAAGCCGCCGGTCTCGAGCAGGCTTCGGGCGATGTAGTTGGTCAGGTTGCGGAA 8910
||||||||| ||||||| ||||| || || |||||||||| ||| |||||||||||
Sbjct 3 GGGTCTGAATCCGCCGGCTTCGAGTAGCGATCTCGCGATGTAGTGGGTGAGGTTGCGGAA 62
Query 8911 CCCGAGTGCGGAGCCGCGCAGGTGTTCGAGCCGTCCGTTGAGCGCCTCGGTCGGCCCGTT 8970
|||||| ||||| ||||| ||||| || || || ||||||| ||||||||||||||||||
Sbjct 63 CCCGAGCGCGGAACCGCGGAGGTGCTCCAGGCGCCCGTTGATCGCCTCGGTCGGCCCGTT 122
Query 8971 GCTGGTGCCGGGTCGTTCGAAGTAGGCGAGCACGTCAGCGGCTCGCTTCTTCAGGGTCCG 9030
|||||||| || |||||| | ||||| | ||| |||| |||| ||| || |||||
Sbjct 123 CGATGTGCCGGGGCGGTCGAAGAACGCGAGGATGTCCGCGGTGCGCTGCTTGAGCGTCCG 182
Query 9031 GCCCAGG-GTGGTGAGCTCGGTGAGCACCTTGGGGACGCCGGCGCTNNNNNNNNNNNNNA 9089
||| ||| || | || || |||||| | |||||||||| ||| |
Sbjct 183 GCCGAGGCGTTG-GACTTCCTTGAGCATCGCGGGGACGCCGCTGCTGACCGAGTCGATCA 241
Query 9090 GCTTCTCCATGAGCTCGCG-GCCACGTTGCCGGTCCTCGTGGCGATAGGCGGCGATCATG 9148
| | ||| | ||| ||| ||| | ||| | ||| |||||||||| ||
Sbjct 242 CCGCCCGCATCATCTCCTTCGCCTTGTT-CTTGTCGGGTTCGCGGTAGGCGGCGACGATC 300
Query 9149 CGCTGGTAGACACCCCAGGTCGCCTCGACCTCGACGTGAGCGTCATCAACGAACAGCGCG 9208
|||||||||| ||||| ||||| |||||||||||||| | || | |||||| ||
Sbjct 301 CGCTGGTAGATGCCCCACGTCGCTTCGACCTCGACGTGCTCCTCGGCCGCGAACACGGCT 360
Query 9209 CGTAGCCTGTCGCTCTGCTTGTCGGTGAGCAGGTCCGCGCCGGTGTGCAGCGTGCGCCGC 9268
|| | | || |||||||||||||||| | | |||||||||||| || ||||| ||
Sbjct 361 TCGAGTCGGGCGGTCTGCTTGTCGGTGAGGAAGCTCGCGCCGGTGTGGAGGGTGCGGCGG 420
Query 9269 GACTTGTAGAGCGGGTCGTC--CCTGAACCCACGGTGCCCGTGGATCGCGAGTTGGACCC 9326
||||||||||||| | | ||| || ||||||||| || | | | |||||||
Sbjct 421 ATGCCGTAGAGCGGGTCGCCGGCGTGA--CCGCGGTGCCCGAGGGTGTCTTGCTGGACCC 478
Query 9327 GGCGCCGGCACCTGTCGAGGGCGTCACCGGCCAGGCGCACGACGTGGAAGGGATCCATCA 9386
| ||||| || |||||| ||||| || || || || ||||||||||| || ||||| |
Sbjct 479 GTTGCCGGGTCCGGTCGAGCGCGTCGCCAGCGAGCCGGACGACGTGGAACGGGTCCATGA 538
Query 9387 CCGTGACCGCGTCCGGGATCTCCTCTGCAGCGGCGGTCTTGAACCCGGTGAAGCCGTCCA 9446
| | || ||||| |||| || || || || ||||||||||||||| |||| |||||||
Sbjct 539 CGGGAACGGCGTCGGGGAGTTCTTCGGCGGCCGCGGTCTTGAACCCGCTGAACCCGTCCA 598
Query 9447 TCGCGACCACCTCGA-CCGCGTC-ACGGAAGGCGTCGTCGCGGTCGGCGAGCCAGGTCTT 9504
||||||| ||||||| |||| || || || | || ||| |||||||||| |||
Sbjct 599 TCGCGACGACCTCGATCCGCTTCGAC--CAGTCCGCGGGCCGGGCGGCGAGCCACTGCTT 656
Query 9505 GAACGCCGCCTTCGACCGGCCCTCGACCATGTCCAGCAGCCTTGCTGGGCCGG----CGC 9560
|||| | ||||| || ||||||||||||||||||| |||||| || |||||||
Sbjct 657 GAACACGGCCTTGGAGCGGCCCTCGACCATGTCCAACAGCCTGGCCGGGCCGGTTTTGTT 716
Query 9561 CATCGCGGACCGGGGTGAGGTCGATGATCACGGTGACGTACTTGTCGCCACGCCTGGTGT 9620
| ||||| ||||||||||||||||||||||||||||| |||||||| ||| ||||
Sbjct 717 CCTCGCG----GGGGTGAGGTCGATGATCACGGTGACGTATTTGTCGCCGAACCTCGTGT 772
Query 9621 GGCGCCAGACGTGCTCATCGACGCCAATGACCTTCACGCCCTCAAACCGCGTGGGGTCGT 9680
| |||||||||||||| |||||||| || |||| || || ||||| | ||||| |
Sbjct 773 GCCGCCAGACGTGCTCGTCGACGCCGATCGTGGTCACACCGTCGAACCGGGCCGGGTCCT 832
Query 9681 TGATCAGCAGCCGCTTGCCTTCAGCCAGGACCGCGTTGTTGGCGGTGTCCCACGCGACCC 9740
||||||| |||||||||| || || |||| |||| |||| ||||||| ||||| ||||
Sbjct 833 CGATCAGCCGCCGCTTGCCCTCGGCGAGGATCGCGGTGTTCGCGGTGTGCCACGATACCC 892
Query 9741 CGAGTCCCTCGGCGACACGGGCGACGGTGAGGTGTGCGACCACGATCCCTTCCAGCGCCC 9800
| || || | ||| | |||| |||||||||||| |||| |||||| | ||| ||||
Sbjct 893 CCAGGCCTGCTGCGGCGCGGGAGACGGTGAGGTGGTCGACGACGATCGCGGTCAGTGCCC 952
Query 9801 ACCGCAGCCCGGTGCGCGAGAGCTTCGCGCGTGGCTCCGCCG----CGGCGCTGGTGTCT 9856
||| | |||| ||| |||| |||||| || ||| |||||| || | | |||
Sbjct 953 ACCCGATCCCGCCGCGGGAGATCTTCGCCCGCGGCGCCGCCGCCTTCGACAC----GTCC 1008
Query 9857 TGGCGCCACACGTGTCCGCAGTCGGCACAGCGGTAGCGGCGCACTACAACTTCCAGCACG 9916
|| ||||| | | ||||| | | || ||||| ||||||||| || ||||
Sbjct 1009 TGCCGCCAGGTCCGGCAGCAGTGGTCGCACCGGTACCGGCGCACTCGCACCAGCAGCGTC 1068
Query 9917 GTCGGTCGCCAGCCCAGCGGCTCGTGGGCCAACCGCCGGATCACGGTGTCACGAGCAGCG 9976
||||| || || | |||||| || |||| | ||| |||||| |||||| | ||
Sbjct 1069 GTCGGCCGGTGTCCGAACGGCTCATGCGCCAGCGGCCTCGTCACGGAGTCACGCGGCACG 1128
Query 9977 CCTTCGCTGCCGCACCGTCGGCACCACTGATCTGGTTCCACCACGCGGCACGCGAGGACC 10036
|| ||| |||||| ||||||||| | || || || ||||||||| | || |||
Sbjct 1129 CCCTCGGCACCGCACTTGCGGCACCACGGGTCGTCGTCGACGACGCGGCACTCCAGCACC 1188
Query 10037 GCACGATCCGGTTCAAGTCGT-TGTCCGGTCAC-GCT--CAGACCGAGGCCGTCGAGTCG 10092
|| || || || || | || | || ||| || ||| || ||||| ||||||| ||
Sbjct 1189 GCCCGGTCGGGCTCGA-TCATCTGGCCG---ACGGCTTCGAGGCCGAGCTCGTCGAGGCG 1244
Query 10093 AGCGAAGGCGGTCAGGTCAGGGCGGCCGAAGCCGGCCGGCGGGGTAGCGTCGGACACGTC 10152
||| | ||| || |||||| |||| ||| || | ||||||
Sbjct 1245 GCAGAACGTGGTGAGATCAGGGGTCGCGAA------------CATAGGGTGGTGCACGTC 1292
Query 10153 GAGGTCTT---TCGGATGGATGGCGTAGGAACCTCCATCGTCGGGAGACCTCGACGTCTA 10209
|||||||| ||||||| | || |||| |||||| | || ||||||||||| |||
Sbjct 1293 GAGGTCTTCCGGCGGATGGGCAGTGTGAGAACTTCCATCCT-GGAAGACCTCGACGCCTA 1351
Query 10210 TCTGCGGACCGACGCGCCCGGCCGAC-CTACACCCTCATCTGAGAAGACCCCGCA 10263
|| ||| ||| | |||| || | ||||||||||| ||| ||||| ||||||
Sbjct 1352 TCCGCGAACC-AGCCGCCGACCCTCCACTACACCCTCAACTGCGAAGAGCCCGCA 1405
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 126656335983192
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |