Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nilaparvata_20lugens_20[genbank_20GCA_5F000757685.1_202014-09-24] 46,558 sequences; 1,140,786,310 total letters Query= NC_031108.1 Length=39640 Score E Sequences producing significant alignments: (Bits) Value seq6398 733 0.0 >seq6398 Length=11417 Score = 733 bits (812), Expect = 0.0 Identities = 1033/1435 (72%), Gaps = 54/1435 (4%) Strand=Plus/Plus Query 8851 GGGTCTGAAGCCGCCGGTCTCGAGCAGGCTTCGGGCGATGTAGTTGGTCAGGTTGCGGAA 8910 ||||||||| ||||||| ||||| || || |||||||||| ||| ||||||||||| Sbjct 3 GGGTCTGAATCCGCCGGCTTCGAGTAGCGATCTCGCGATGTAGTGGGTGAGGTTGCGGAA 62 Query 8911 CCCGAGTGCGGAGCCGCGCAGGTGTTCGAGCCGTCCGTTGAGCGCCTCGGTCGGCCCGTT 8970 |||||| ||||| ||||| ||||| || || || ||||||| |||||||||||||||||| Sbjct 63 CCCGAGCGCGGAACCGCGGAGGTGCTCCAGGCGCCCGTTGATCGCCTCGGTCGGCCCGTT 122 Query 8971 GCTGGTGCCGGGTCGTTCGAAGTAGGCGAGCACGTCAGCGGCTCGCTTCTTCAGGGTCCG 9030 |||||||| || |||||| | ||||| | ||| |||| |||| ||| || ||||| Sbjct 123 CGATGTGCCGGGGCGGTCGAAGAACGCGAGGATGTCCGCGGTGCGCTGCTTGAGCGTCCG 182 Query 9031 GCCCAGG-GTGGTGAGCTCGGTGAGCACCTTGGGGACGCCGGCGCTNNNNNNNNNNNNNA 9089 ||| ||| || | || || |||||| | |||||||||| ||| | Sbjct 183 GCCGAGGCGTTG-GACTTCCTTGAGCATCGCGGGGACGCCGCTGCTGACCGAGTCGATCA 241 Query 9090 GCTTCTCCATGAGCTCGCG-GCCACGTTGCCGGTCCTCGTGGCGATAGGCGGCGATCATG 9148 | | ||| | ||| ||| ||| | ||| | ||| |||||||||| || Sbjct 242 CCGCCCGCATCATCTCCTTCGCCTTGTT-CTTGTCGGGTTCGCGGTAGGCGGCGACGATC 300 Query 9149 CGCTGGTAGACACCCCAGGTCGCCTCGACCTCGACGTGAGCGTCATCAACGAACAGCGCG 9208 |||||||||| ||||| ||||| |||||||||||||| | || | |||||| || Sbjct 301 CGCTGGTAGATGCCCCACGTCGCTTCGACCTCGACGTGCTCCTCGGCCGCGAACACGGCT 360 Query 9209 CGTAGCCTGTCGCTCTGCTTGTCGGTGAGCAGGTCCGCGCCGGTGTGCAGCGTGCGCCGC 9268 || | | || |||||||||||||||| | | |||||||||||| || ||||| || Sbjct 361 TCGAGTCGGGCGGTCTGCTTGTCGGTGAGGAAGCTCGCGCCGGTGTGGAGGGTGCGGCGG 420 Query 9269 GACTTGTAGAGCGGGTCGTC--CCTGAACCCACGGTGCCCGTGGATCGCGAGTTGGACCC 9326 ||||||||||||| | | ||| || ||||||||| || | | | ||||||| Sbjct 421 ATGCCGTAGAGCGGGTCGCCGGCGTGA--CCGCGGTGCCCGAGGGTGTCTTGCTGGACCC 478 Query 9327 GGCGCCGGCACCTGTCGAGGGCGTCACCGGCCAGGCGCACGACGTGGAAGGGATCCATCA 9386 | ||||| || |||||| ||||| || || || || ||||||||||| || ||||| | Sbjct 479 GTTGCCGGGTCCGGTCGAGCGCGTCGCCAGCGAGCCGGACGACGTGGAACGGGTCCATGA 538 Query 9387 CCGTGACCGCGTCCGGGATCTCCTCTGCAGCGGCGGTCTTGAACCCGGTGAAGCCGTCCA 9446 | | || ||||| |||| || || || || ||||||||||||||| |||| ||||||| Sbjct 539 CGGGAACGGCGTCGGGGAGTTCTTCGGCGGCCGCGGTCTTGAACCCGCTGAACCCGTCCA 598 Query 9447 TCGCGACCACCTCGA-CCGCGTC-ACGGAAGGCGTCGTCGCGGTCGGCGAGCCAGGTCTT 9504 ||||||| ||||||| |||| || || || | || ||| |||||||||| ||| Sbjct 599 TCGCGACGACCTCGATCCGCTTCGAC--CAGTCCGCGGGCCGGGCGGCGAGCCACTGCTT 656 Query 9505 GAACGCCGCCTTCGACCGGCCCTCGACCATGTCCAGCAGCCTTGCTGGGCCGG----CGC 9560 |||| | ||||| || ||||||||||||||||||| |||||| || ||||||| Sbjct 657 GAACACGGCCTTGGAGCGGCCCTCGACCATGTCCAACAGCCTGGCCGGGCCGGTTTTGTT 716 Query 9561 CATCGCGGACCGGGGTGAGGTCGATGATCACGGTGACGTACTTGTCGCCACGCCTGGTGT 9620 | ||||| ||||||||||||||||||||||||||||| |||||||| ||| |||| Sbjct 717 CCTCGCG----GGGGTGAGGTCGATGATCACGGTGACGTATTTGTCGCCGAACCTCGTGT 772 Query 9621 GGCGCCAGACGTGCTCATCGACGCCAATGACCTTCACGCCCTCAAACCGCGTGGGGTCGT 9680 | |||||||||||||| |||||||| || |||| || || ||||| | ||||| | Sbjct 773 GCCGCCAGACGTGCTCGTCGACGCCGATCGTGGTCACACCGTCGAACCGGGCCGGGTCCT 832 Query 9681 TGATCAGCAGCCGCTTGCCTTCAGCCAGGACCGCGTTGTTGGCGGTGTCCCACGCGACCC 9740 ||||||| |||||||||| || || |||| |||| |||| ||||||| ||||| |||| Sbjct 833 CGATCAGCCGCCGCTTGCCCTCGGCGAGGATCGCGGTGTTCGCGGTGTGCCACGATACCC 892 Query 9741 CGAGTCCCTCGGCGACACGGGCGACGGTGAGGTGTGCGACCACGATCCCTTCCAGCGCCC 9800 | || || | ||| | |||| |||||||||||| |||| |||||| | ||| |||| Sbjct 893 CCAGGCCTGCTGCGGCGCGGGAGACGGTGAGGTGGTCGACGACGATCGCGGTCAGTGCCC 952 Query 9801 ACCGCAGCCCGGTGCGCGAGAGCTTCGCGCGTGGCTCCGCCG----CGGCGCTGGTGTCT 9856 ||| | |||| ||| |||| |||||| || ||| |||||| || | | ||| Sbjct 953 ACCCGATCCCGCCGCGGGAGATCTTCGCCCGCGGCGCCGCCGCCTTCGACAC----GTCC 1008 Query 9857 TGGCGCCACACGTGTCCGCAGTCGGCACAGCGGTAGCGGCGCACTACAACTTCCAGCACG 9916 || ||||| | | ||||| | | || ||||| ||||||||| || |||| Sbjct 1009 TGCCGCCAGGTCCGGCAGCAGTGGTCGCACCGGTACCGGCGCACTCGCACCAGCAGCGTC 1068 Query 9917 GTCGGTCGCCAGCCCAGCGGCTCGTGGGCCAACCGCCGGATCACGGTGTCACGAGCAGCG 9976 ||||| || || | |||||| || |||| | ||| |||||| |||||| | || Sbjct 1069 GTCGGCCGGTGTCCGAACGGCTCATGCGCCAGCGGCCTCGTCACGGAGTCACGCGGCACG 1128 Query 9977 CCTTCGCTGCCGCACCGTCGGCACCACTGATCTGGTTCCACCACGCGGCACGCGAGGACC 10036 || ||| |||||| ||||||||| | || || || ||||||||| | || ||| Sbjct 1129 CCCTCGGCACCGCACTTGCGGCACCACGGGTCGTCGTCGACGACGCGGCACTCCAGCACC 1188 Query 10037 GCACGATCCGGTTCAAGTCGT-TGTCCGGTCAC-GCT--CAGACCGAGGCCGTCGAGTCG 10092 || || || || || | || | || ||| || ||| || ||||| ||||||| || Sbjct 1189 GCCCGGTCGGGCTCGA-TCATCTGGCCG---ACGGCTTCGAGGCCGAGCTCGTCGAGGCG 1244 Query 10093 AGCGAAGGCGGTCAGGTCAGGGCGGCCGAAGCCGGCCGGCGGGGTAGCGTCGGACACGTC 10152 ||| | ||| || |||||| |||| ||| || | |||||| Sbjct 1245 GCAGAACGTGGTGAGATCAGGGGTCGCGAA------------CATAGGGTGGTGCACGTC 1292 Query 10153 GAGGTCTT---TCGGATGGATGGCGTAGGAACCTCCATCGTCGGGAGACCTCGACGTCTA 10209 |||||||| ||||||| | || |||| |||||| | || ||||||||||| ||| Sbjct 1293 GAGGTCTTCCGGCGGATGGGCAGTGTGAGAACTTCCATCCT-GGAAGACCTCGACGCCTA 1351 Query 10210 TCTGCGGACCGACGCGCCCGGCCGAC-CTACACCCTCATCTGAGAAGACCCCGCA 10263 || ||| ||| | |||| || | ||||||||||| ||| ||||| |||||| Sbjct 1352 TCCGCGAACC-AGCCGCCGACCCTCCACTACACCCTCAACTGCGAAGAGCCCGCA 1405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126656335983192