Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq1288 132 2e-28 seq575 105 3e-20 >seq1288 Length=374116 Score = 132 bits (146), Expect = 2e-28 Identities = 103/122 (84%), Gaps = 3/122 (2%) Strand=Plus/Minus Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621 |||||| |||||||||||||||||||||||||| ||| |||||||| |||||| | Sbjct 361129 GCTGTT---ACCCGAAAGATGGTGAACTATGCCTGGCCAGGACGAAGCCAGGGGAAACCC 361073 Query 622 TGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 ||||||||| || |||| ||||| ||||||||||||||||| | ||||||||||||| Sbjct 361072 TGGTGGAGGTCCGAAGCGATTCTGACGTGCAAATCGATCGTCTGAGCTGGGTATAGGGGC 361013 Query 682 GA 683 || Sbjct 361012 GA 361011 >seq575 Length=550334 Score = 105 bits (116), Expect = 3e-20 Identities = 91/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 |||||||||| |||||||| ||||||| | | |||||||| |||||| ||||||||| Sbjct 286535 ACCCGAAAGACGGTGAACTCTGCCTGACCAAGACGAAGCCAGGGGAAACCTTGGTGGAGG 286594 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 || |||| ||||| |||||||||||| |||| | ||| |||||||| || Sbjct 286595 TCCGAAGCGATTCTGACGTGCAAATCGACCGTCTGAGCTGGTTATAGGGGAGA 286647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079630588100