Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq803 295 2e-77 seq1757 273 7e-71 seq1288 196 2e-47 seq5631 156 1e-35 seq64 134 5e-29 seq1095 100 9e-19 >seq803 Length=464868 Score = 295 bits (326), Expect = 2e-77 Identities = 223/262 (85%), Gaps = 3/262 (1%) Strand=Plus/Plus Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-- 231 ||||| ||| | ||||||| |||| || | || ||||||||||||| || ||| Sbjct 410659 TCCGCCTCACCAAGTAAGTAAGGAAACTATGAAAGTGGTGGTATTTCACTGTCGACGAGT 410718 Query 232 -AACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAA 290 |||| ||||||||||| | |||||||||| ||| | ||| | |||||||||||| Sbjct 410719 TAACGCCTCCCACTTATGCAACACCTCTCATGTCTCCTTACAGTACCAGACTAGAGTCAA 410778 Query 291 GCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTT 350 |||||||||||||||||||||||| |||||| |||||||||||||||||| ||||||| Sbjct 410779 GCTCAACAGGGTCTTCTTTCCCCGATGATTCTTCCAAGCCCGTTCCCTTGGTCGTGGTTT 410838 Query 351 CGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAAT 410 ||||||||||||| ||| ||||| |||||||||||||||||||||||||||||||||||| Sbjct 410839 CGCTAGATAGTAGGTAGAGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAAT 410898 Query 411 TAGATGACGAGGCATTTGGCTA 432 |||||||||||||||||||||| Sbjct 410899 TAGATGACGAGGCATTTGGCTA 410920 Score = 167 bits (184), Expect = 8e-39 Identities = 98/102 (96%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct 426129 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTTTTTGAATTTCTTCACG 426070 Query 492 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||| || Sbjct 426069 TTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCATCA 426028 Score = 125 bits (138), Expect = 2e-26 Identities = 72/74 (97%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 426402 AGTAGGTAGGGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 426343 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 426342 GAGGCATTTGGCTA 426329 >seq1757 Length=269464 Score = 273 bits (302), Expect = 7e-71 Identities = 178/196 (91%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||| |||||||||||| ||| | ||| | |||||||||| ||||||| Sbjct 67959 CTCCCACTTATGCTACACCTCTCATGTCTCCTTACAGTACCAGACTAGAGTCTAGCTCAA 67900 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 ||||||||||||||||||||||||| ||||||||||||||||||| ||||||| ||||| Sbjct 67899 CAGGGTCTTCTTTCCCCGCTGATTCTTCCAAGCCCGTTCCCTTGGCCGTGGTTTTGCTAG 67840 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct 67839 ATAGTAGGTAGGGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 67780 Query 417 ACGAGGCATTTGGCTA 432 |||||||||||||||| Sbjct 67779 ACGAGGCATTTGGCTA 67764 Score = 154 bits (170), Expect = 5e-35 Identities = 108/123 (88%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 251 ACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTC 310 |||||||||| ||| | ||| |||||||||||||||||||||||||||||||| Sbjct 42746 ACACCTCTCATGTCTCCTTACAGTACAAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTC 42687 Query 311 CCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGA 370 ||||||||||| ||||||||||||||||||| |||||||||||||||||||| |||||| Sbjct 42686 CCCGCTGATTCTTCCAAGCCCGTTCCCTTGGCCGTGGTTTCGCTAGATAGTAGGTAGGGA 42627 Query 371 CAG 373 ||| Sbjct 42626 CAG 42624 Score = 143 bits (158), Expect = 9e-32 Identities = 95/105 (90%), Gaps = 4/105 (4%) Strand=Plus/Plus Query 332 GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCC 391 ||||||||||| ||||||||||||||||| || ||||||||| ||||||||||||||||| Sbjct 12012 GTTCCCTTGGCCGTGGTTTCGCTAGATAGCAGGTAGGGACAGAGGGAATCTCGTTAATCC 12071 Query 392 ATTCATGCGCGTCACTAATTAG----ATGACGAGGCATTTGGCTA 432 |||||| ||||||||||||||| |||| |||||||||||||| Sbjct 12072 ATTCATACGCGTCACTAATTAGGTATATGAAGAGGCATTTGGCTA 12116 Score = 125 bits (138), Expect = 2e-26 Identities = 72/74 (97%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 50821 AGTAGGTAGGGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 50762 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 50761 GAGGCATTTGGCTA 50748 Score = 122 bits (134), Expect = 3e-25 Identities = 72/75 (96%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 4169 AGTAGGTAGGGACAGAGGGAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGAC 4228 Query 419 GAGGCATTTGGCTAC 433 ||||||||||||||| Sbjct 4229 GAGGCATTTGGCTAC 4243 Score = 118 bits (130), Expect = 3e-24 Identities = 71/75 (95%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 |||||| ||||||||| ||||||||||||| | ||||||||||||||||||||||||||| Sbjct 41754 TAGTAGGTAGGGACAGAGGGAATCTCGTTATTGCATTCATGCGCGTCACTAATTAGATGA 41695 Query 418 CGAGGCATTTGGCTA 432 ||||||||||||||| Sbjct 41694 CGAGGCATTTGGCTA 41680 Score = 116 bits (128), Expect = 1e-23 Identities = 72/77 (94%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 || ||||| |||| |||| ||| ||||||||||||||||||||||||||||||||||||| Sbjct 10851 GAGAGTAGGTAGGAACAGGGGGCATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 10792 Query 416 GACGAGGCATTTGGCTA 432 ||||||||||||||||| Sbjct 10791 GACGAGGCATTTGGCTA 10775 >seq1288 Length=374116 Score = 196 bits (216), Expect = 2e-47 Identities = 165/202 (82%), Gaps = 3/202 (1%) Strand=Plus/Plus Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGA-- 231 ||||| ||| | ||||||| |||| |||| |||||||||||||||| | ||| Sbjct 151996 TCCGCCTCACCAAGTAAGTAAGGAAACTATAAAAGTAGTGGTATTTCACTGTTGACGAGT 152055 Query 232 -AACGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAA 290 |||| |||||| |||| ||||| |||||| ||| | ||| | |||||||||||| Sbjct 152056 TAACGCCTCCCATTTATGCTACATCTCTCATGTCTCCTTACAGTACCAGACTAGAGTCAA 152115 Query 291 GCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTT 350 ||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||| Sbjct 152116 GCTCAACAGGGTCTTCTTTCCCCGCTGATTCTTCCAAGCACGTTCCCTTGGTCGTGGTTT 152175 Query 351 CGCTAGATAGTAGATAGGGACA 372 ||||||||||||| |||||||| Sbjct 152176 CGCTAGATAGTAGGTAGGGACA 152197 >seq5631 Length=24212 Score = 156 bits (172), Expect = 1e-35 Identities = 97/103 (94%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG-AATTTCTTCAC 490 ||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| Sbjct 15434 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTTTTTTTAATTTCTTCAC 15493 Query 491 TTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||| || Sbjct 15494 GTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCATCA 15536 Score = 125 bits (138), Expect = 2e-26 Identities = 72/74 (97%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 1439 AGTAGGTAGGGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 1498 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 1499 GAGGCATTTGGCTA 1512 Score = 125 bits (138), Expect = 2e-26 Identities = 72/74 (97%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct 13826 AGTAGGTAGGGACAGAGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 13885 Query 419 GAGGCATTTGGCTA 432 |||||||||||||| Sbjct 13886 GAGGCATTTGGCTA 13899 Score = 122 bits (134), Expect = 3e-25 Identities = 72/75 (96%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 359 AGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGAC 418 ||||| ||||||||| ||||||||||||||||| |||||||||||||||||||||||||| Sbjct 24066 AGTAGGTAGGGACAGAGGGAATCTCGTTAATCCTTTCATGCGCGTCACTAATTAGATGAC 24125 Query 419 GAGGCATTTGGCTAC 433 ||||||||||||||| Sbjct 24126 GAGGCATTTGGCTAC 24140 Score = 100 bits (110), Expect = 9e-19 Identities = 55/55 (100%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 378 AATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7647 AATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 7701 >seq64 Length=1221219 Score = 134 bits (148), Expect = 5e-29 Identities = 95/109 (87%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 324 CCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTC 383 |||| || ||| || |||| ||||||||||||||||||||||||||| || || ||||| Sbjct 1142674 CCAAACCTGTTTCCGTGGCCGTGGTTTCGCTAGATAGTAGATAGGGATAGAAGGCATCTC 1142615 Query 384 GTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTA 432 |||||| |||||||||||||||||||||||||||| ||||| ||||| Sbjct 1142614 AGTAATCCTTTCATGCGCGTCACTAATTAGATGACGATGCATTCGGCTA 1142566 >seq1095 Length=306527 Score = 100 bits (110), Expect = 9e-19 Identities = 84/102 (82%), Gaps = 2/102 (2%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGC--TTGGTTGAATTTCTTCACTT 492 ||||||||||||| || ||| ||||||||||||| || || || |||||||| || | Sbjct 165363 TTAAGAGAGTCATTGTCACTTTCGCCGTTTACCCGTGCATTTTTTTTAATTTCTTTACGT 165422 Query 493 TGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534 ||||||||||||||||| || | ||||||||| |||| ||| Sbjct 165423 TGACATTCAGAGCACTGTGCTAAGATCACATTGTGTCATCAT 165464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1634918385856