Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oncopeltus_20fasciatus_20[genbank_20GCA_5F000696205.1_202014-05-29] 17,222 sequences; 1,098,671,531 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq246 158 4e-36 >seq246 Length=762683 Score = 158 bits (174), Expect = 4e-36 Identities = 233/322 (72%), Gaps = 21/322 (7%) Strand=Plus/Plus Query 191 CTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGG-CCAT 249 |||||||||| || ||||| | |||| ||||||| || || |||| | | || | Sbjct 454354 CTACCATCGACAGCTGATAAGTCAGACATTTGAAGGATATGTCACCGGTACTGTGACCGT 454413 Query 250 GCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCT 309 ||||| || ||||| || ||| |||| ||||| | |||| ||| Sbjct 454414 GCGATCTGTGGTGTTATCCAGAGTCAT-----AGCC-----GGGCGAATGGTTTTGATCA 454463 Query 310 AATAAA----TACACCCCTTCCGAAGTCGGGGTTT-TTAGCATGTATTAGCTCTAGAATT 364 |||||| | | | || || |||||| || || ||||||||||||||||||||| Sbjct 454464 AATAAAAGCGTCCTCTCCATCGCTGGTCGGGACTTGTTTGCATGTATTAGCTCTAGAATT 454523 Query 365 ACCACGGTTATCCATGT-AGTAAGGTACT-ATCAAATAAACGATAACTGATTTAATGAGC 422 ||||| |||||||| || ||| || | | ||| ||||| || || | |||| ||||| Sbjct 454524 ACCACAGTTATCCACGTGAGT--GGCATTTATCCGGTAAACTATGACCGGTTTACTGAGC 454581 Query 423 CATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAG 482 | || || |||||||| || || ||| |||| |||| |||||||||||| ||||||| Sbjct 454582 CTTTTGCGGTTTCACTTTA-AGTCAGCTCGTACTGAGACTTGCATGGCTTAAGCTTTGAG 454640 Query 483 ACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||| Sbjct 454641 ACAAGCATATGACTACTGGCAG 454662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510139878912