Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq4139 205 2e-50 >seq4139 Length=6164 Score = 205 bits (226), Expect = 2e-50 Identities = 249/337 (74%), Gaps = 12/337 (4%) Strand=Plus/Plus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| || |||||| ||| |||||||| | || |||||| | Sbjct 3364 CCCGACGAGGGGAGTGAAACAGTACCTGAAACCGAATGCCTACAAACAGTTGGAGCCCAA 3423 Query 64 TGAT-----TCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCA 118 | | | |||||| |||| ||||||| |||||| | | ||| |||||| | || | Sbjct 3424 GGTTCGTCCTGGGTGACAGCGTACCTTTTGTATAATGGGTCAGCGACTTAGTC-TGACGA 3482 Query 119 GCGAGGTTAAGGGCTTCAGGCCCGT-TAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGAC 177 || || ||||| | || || ||| || || ||||||||| || ||||||||| Sbjct 3483 GCAAGCTTAAG-----CCGGTAGGTGTAGGCGTAGCGAAAGCGAGTCTGAACAGGGCGTT 3537 Query 178 GAGTTGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGG 237 |||| || | ||||| ||||||| |||||||| ||| ||||||||||||| ||| Sbjct 3538 CAGTTCGTCGGATTAGACCCGAAACCAAGTGATCTAGCCATGAGCAGGTTGAAGGTACGG 3597 Query 238 TAACGCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGT 297 |||| ||| |||||||||||||| || |||| || | |||||||| | || | Sbjct 3598 TAACACGTACTGGAGGACCGAACCCATATCTGTTGCAATAGATCGGGATGACTTGTGGCT 3657 Query 298 AGGGGTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||||||||||||||||||||||| ||| |||||| || Sbjct 3658 AGGGGTGAAAGGCCAATCAAACTTGGAGATAGCTGGT 3694 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972731154944