Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq533 145 1e-32 seq1873 138 2e-30 seq1688 113 8e-23 >seq533 Length=64277 Score = 145 bits (160), Expect = 1e-32 Identities = 186/247 (75%), Gaps = 7/247 (3%) Strand=Plus/Minus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTT-GCTCGAATACATTAGCATGG 132 ||||| ||||| |||| |||||| |||| || || ||| ||| ||||| |||||| Sbjct 44187 TTTACCTTGAATAAATCAGAGTGCTCAAGACAAGCGTTTCGCTTGAATATTCGTGCATGG 44128 Query 133 AATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTA 192 |||||| ||| ||||| | |||||| || ||||||| || || |||| |||||| ||| Sbjct 44127 AATAATGGAACAGGACTT-CGGTTCG-TTCTGTTGGTCTC-AGAACCGATGTAATGGTTA 44071 Query 193 ATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGA-TTTATT 251 | ||||| || |||||| || |||| || |||||||||||||||||| || Sbjct 44070 AGAGGGACAGACGGGGGCATCCGTATCGCTGCGTGAGAGGTGAAATTCTTGGACCGTAGC 44011 Query 252 GAAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAG 311 | ||| ||||||||||||| || |||| |||| ||||||||||| ||||||||| Sbjct 44010 G-GGACGCCCTACTGCGAAAGCATTTGTCAAGAATGTCTTCATTAATCA-AGAACGAAAG 43953 Query 312 TTAGGGG 318 | || || Sbjct 43952 TCAGAGG 43946 >seq1873 Length=17552 Score = 138 bits (152), Expect = 2e-30 Identities = 180/243 (74%), Gaps = 7/243 (3%) Strand=Plus/Plus Query 77 ACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTG-CTCGAATACATTAGCATGGAAT 135 ||||||| ||||||||||| | |||||| | ||| || ||||| | ||||||||| Sbjct 10116 ACTTTGATTAAATTAGAGTGCTTAAAGCAAGTGTTTTACTTGAATATAAATGCATGGAAT 10175 Query 136 AATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATA 195 || ||||| | || ||||||||| |||||||| | || || | ||||||| | | Sbjct 10176 GATGGAATATGTTGTT--GTTCTATTT-GTTGGTTTTT--GAACGATGAAATGATTGAAA 10230 Query 196 GGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAG 255 || | || ||||| | ||||| || ||||||||||||||| || ||| Sbjct 10231 GGAACTGTTGGGGGCATTCGTATTGTTGTGAGAGAGGTGAAATTCTTAGACCACAGCAAG 10290 Query 256 ACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTAG 315 || ||||||||||||||| || ||||| ||||||||||| |||| ||||||||||||| Sbjct 10291 ACGAACTACTGCGAAAGCATTTGCCAAGAATGTTTTCATTGATCA-AGAACGAAAGTTAG 10349 Query 316 GGG 318 || Sbjct 10350 AGG 10352 >seq1688 Length=11477 Score = 113 bits (124), Expect = 8e-23 Identities = 165/228 (72%), Gaps = 4/228 (2%) Strand=Plus/Plus Query 74 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGA 133 ||||||||||| |||| | || | ||||||||||| ||||| | || || |||||| Sbjct 3883 TTTACTTTGAATAAATCAAAGCGCTCAAAGCAGGCGATTGCTTGTATGTGCTATCATGGA 3942 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||||| || ||||| | |||||||| ||| ||||||| || | || |||||||||| Sbjct 3943 ATAATAAAAGAGGAC-TTCGGTTCTA-TTTATTGGTTT-AAGAATCGAATTAATGATTAA 3999 Query 194 TAGGGA-TAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTG 252 || || | ||||||| | |||| | | ||||||||||||| |||| | Sbjct 4000 GAGAGACAAATCGGGGGCATTCGTATCCCTGCGCGAGAGGTGAAATTCGTGGACCGCAGG 4059 Query 253 AAGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCA 300 ||| | | |||||||| || ||||| |||| ||||||||||| Sbjct 4060 GGGACGTCCAAAAGCGAAAGCATTTGCCAAGAATGTCTTCATTAATCA 4107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915135231296