Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01000538.1 Length=248 Score E Sequences producing significant alignments: (Bits) Value seq4139 174 2e-41 >seq4139 Length=6164 Score = 174 bits (192), Expect = 2e-41 Identities = 190/248 (77%), Gaps = 11/248 (4%) Strand=Plus/Minus Query 1 CTTATCCTTCCATCACCGGGCAGGCGTCAGTCCGTATACATCGACTTACCGTCTTCGCAC 60 |||| ||||||| ||||||||||||||||| || ||||| ||| ||| | | ||||||| Sbjct 4619 CTTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGC-GACTTCGCAG 4561 Query 61 GGACCTGTGTTTTTAGTAAACAGTCGCTTCCCTCTATTCTCTGCGACCACCACCAGCTCA 120 | ||||||||||| ||||||||||||| ||| || ||| || ||||| ||| || Sbjct 4560 AGCCCTGTGTTTTTGGTAAACAGTCGCTACCCCCTGGTCTGTG---CCACCCCCATCT-- 4506 Query 121 ACACGTCGTTCACCAGCAGTGGCACCCCTTCTCCCGAAGTTACGGGGCCATTTTGCCGAA 180 || | | | || | || | ||||| ||||||||||| | ||||||||||| Sbjct 4505 ---AGTTGCCTAAATGAAG-GTCA-CGCTTCTTCCGAAGTTACGCGTGCATTTTGCCGAG 4451 Query 181 TTCCTTAACCACAGTTCACCCGAACGCCTTAGTATTCTCTACCTGACCACCTGTGTCGGT 240 |||||| | | |||||| | | | |||||| |||||||||||| | ||||| |||||||| Sbjct 4450 TTCCTTCAACGCAGTTCTCTCAAGCGCCTTGGTATTCTCTACCAGTCCACCAGTGTCGGT 4391 Query 241 TTACGGTA 248 ||| |||| Sbjct 4390 TTAGGGTA 4383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694352393021