Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq4139 325 1e-86 >seq4139 Length=6164 Score = 325 bits (360), Expect = 1e-86 Identities = 319/408 (78%), Gaps = 25/408 (6%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | || |||||||||||||||||| | ||||||||||| | ||||| Sbjct 4791 GCATCTTCACGGGGAATTCAATTTCACTGAGTCTGCGTTGGAGACAGCGGGGAAGTCGTT 4732 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4731 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 4672 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATC 192 | |||||||||||||||||| |||||||| || | |||| || | | | || Sbjct 4671 TAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCAATGCTT-------GCACATCTCCTC 4619 Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252 |||||||||| ||||||||||||||||| |||||||||||| ||| || || |||| Sbjct 4618 --TTAACCTTCCAGCACCGGGCAGGCGTCAGACCCTATACGTCGTCTTGCGACTTCGCAG 4561 Query 253 AGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTA 312 || |||||||||| ||||||||||| | |||||| | | | ||| ||| || Sbjct 4560 AGCCCTGTGTTTTTGGTAAACAGTCGCTACCCCCTGGTCTGTGCCACCCCCATCTAGTTG 4501 Query 313 CGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG-GTGCCTTTTTG 371 | | || | | |||| ||||| ||||||||||| ||| | ||||| Sbjct 4500 CCTA--AA-----TGAAGGTCAC-------GCTTCTTCCGAAGTTACGCGTG-CATTTTG 4456 Query 372 CCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 419 || ||||||||| | ||||||||||||||||||||||||||||||| Sbjct 4455 CCGAGTTCCTTCAACGCAGTTCTCTCAAGCGCCTTGGTATTCTCTACC 4408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260710773184