Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq533 242 6e-62 seq1873 217 2e-54 seq1688 196 8e-48 seq175 104 4e-20 seq1118 91.5 2e-16 seq456 75.2 2e-11 >seq533 Length=64277 Score = 242 bits (268), Expect = 6e-62 Identities = 205/248 (83%), Gaps = 8/248 (3%) Strand=Plus/Plus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 ||||||||||||||||| |||| ||||||||||||||||||||||||||||||||| ||| Sbjct 43457 CAGTGTAGCGCGCGTGCAGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTGC-TCA 43515 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGA--AGCCAGCCACCA----ACCAT 130 | || | |||| |||||| | |||||||||||| || ||| | | || | Sbjct 43516 ATCT-CGTGCGGCTAGAAGCCGCTTGTCCCTCTAAGACGAGTAAGCGCCGAGAGCACAAG 43574 Query 131 AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 || | | | | ||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 43575 GATCTCGGCGCCGAGTTAGCAGGTTAGAGTCTCGTTCGTTATCGGAATAAACCAGACAAA 43634 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 ||||||||||||||||||||||||||||||||||| ||| ||||||||||||| || || Sbjct 43635 TCACTCCACCAACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAGAACTCTC 43694 Query 251 AATCTGTC 258 |||||||| Sbjct 43695 AATCTGTC 43702 Score = 176 bits (194), Expect = 7e-42 Identities = 109/117 (93%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 142 CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCA 201 ||| |||||||| || |||||||||||||||||||||||||||||||||| |||||||| Sbjct 46826 CTAGTTAGCAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCA 46885 Query 202 ACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| Sbjct 46886 ACTAAGAACGGCCATGCACCACCACCCACCGAATCAAGAAAGAGCTCTCAATCTGTC 46942 Score = 114 bits (126), Expect = 2e-23 Identities = 87/100 (87%), Gaps = 2/100 (2%) Strand=Plus/Plus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 46642 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTG-CTC 46700 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAG 115 | | || |||| |||||| |||||||||||||| Sbjct 46701 TATC-TCGTGCGGCTAGAAGCCGCCTGTCCCTCTAAGAAG 46739 >seq1873 Length=17552 Score = 217 bits (240), Expect = 2e-54 Identities = 199/245 (81%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct 10834 TCAATGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTGC-TC 10776 Query 76 AAACTTCCATTGGCTGGAAGCCAATAG-TCCCTCTAAGAAGCCAGCCACCAACCAT-AGT 133 || || | | || || | | |||| |||||| | || | ||| | | Sbjct 10775 TG--TTTCAAAGTGTTAAACACACTTGATCCCATTAAGAAACACCGCAGAAGACATGATT 10718 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | || | |||||| ||| || ||||||||||||||||||||||||||||||||||| Sbjct 10717 CTGTGTGT-TATTTAATAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 10659 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 10658 CTCCACCAACTAAGAACGGCCATGCACCACCATCCACCAAATCAAGAAAGAGCTATCAAT 10599 Query 254 CTGTC 258 ||||| Sbjct 10598 CTGTC 10594 Score = 217 bits (240), Expect = 2e-54 Identities = 199/245 (81%), Gaps = 6/245 (2%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| || Sbjct 14259 TCAATGTAGCGCGCGTGCGGCCCCGAACATCTAAGGGCATCACAGACCTGTTATTGC-TC 14201 Query 76 AAACTTCCATTGGCTGGAAGCCAATAG-TCCCTCTAAGAAGCCAGCCACCAACCAT-AGT 133 || || | | || || | | |||| |||||| | || | ||| | | Sbjct 14200 TG--TTTCAAAGTGTTAAACACACTTGATCCCATTAAGAAACACCGCAGAAGACATGATT 14143 Query 134 CGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 193 | || | |||||| ||| || ||||||||||||||||||||||||||||||||||| Sbjct 14142 CTGTGTGT-TATTTAATAGGCTAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAATCA 14084 Query 194 CTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAAT 253 |||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct 14083 CTCCACCAACTAAGAACGGCCATGCACCACCATCCACCAAATCAAGAAAGAGCTATCAAT 14024 Query 254 CTGTC 258 ||||| Sbjct 14023 CTGTC 14019 >seq1688 Length=11477 Score = 196 bits (216), Expect = 8e-48 Identities = 192/243 (79%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 17 CAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCA 76 |||||||||||||||||||||| | ||||| |||||||||||||||||||||||||| | Sbjct 10627 CAGTGTAGCGCGCGTGCGGCCCCGGACATCGAAGGGCATCACAGACCTGTTATTGCCGCT 10568 Query 77 AACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGA 136 || ||||| ||||| | |||| ||| |||| | || || | ||| Sbjct 10567 TG--TCGTGTGGCTTAGAGCCACTTATCCCACTAGGAAGTT--CAACTGACGAAAGTATC 10512 Query 137 TGGGG-CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACT 195 | | |||| ||| ||||| ||||||||||||||||| ||| || ||||||||||| | Sbjct 10511 AGAGAACTATCTAG-AGGTTGCGGTCTCGTTCGTTATCGCAATAAAGCAGACAAATCAAT 10453 Query 196 CCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCT 255 |||| ||||||||||||||||||||||||| ||| ||||||||||| | || ||||||| Sbjct 10452 CCACGAACTAAGAACGGCCATGCACCACCAACCACCGAATCAAGAAAAAACTCTCAATCT 10393 Query 256 GTC 258 ||| Sbjct 10392 GTC 10390 >seq175 Length=389053 Score = 104 bits (114), Expect = 4e-20 Identities = 71/80 (89%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 |||||||||||||| |||||||| |||||| ||||| |||||||||| || ||||||| Sbjct 70304 TAACCAGACAAATCGTTCCACCAATTAAGAAGGGCCACGCACCACCACACACCGAATCAA 70245 Query 239 GAAAGAGCTATCAATCTGTC 258 ||||||||| |||||||||| Sbjct 70244 GAAAGAGCTTTCAATCTGTC 70225 >seq1118 Length=95362 Score = 91.5 bits (100), Expect = 2e-16 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 169 TTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCC 228 |||| ||||||||||||||||||| || |||||| ||||||| || |||| || || || Sbjct 24148 TTATAGGAATTAACCAGACAAATCGCTTCACCAAATAAGAACAACCGTGCATCATCATCC 24089 Query 229 ATAGAATCAAGAAAGAGCTATCAATCTGTC 258 | |||| |||||| ||| |||||||||| Sbjct 24088 ACCGAATTAAGAAAAAGCCCTCAATCTGTC 24059 >seq456 Length=88869 Score = 75.2 bits (82), Expect = 2e-11 Identities = 55/64 (86%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 146 TTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTA 205 || ||||| || |||||||| ||||| ||||||||||||||||||| ||| |||||||| Sbjct 74176 TTGGCAGGATATAGTCTCGTTTGTTATAGGAATTAACCAGACAAATCGCTCTACCAACTA 74235 Query 206 AGAA 209 ||| Sbjct 74236 TGAA 74239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796745372637