Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq533 358 1e-96 seq442 154 3e-35 seq1688 149 1e-33 seq1245 134 2e-29 seq263 95.1 2e-17 >seq533 Length=64277 Score = 358 bits (396), Expect = 1e-96 Identities = 237/263 (90%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 39105 GTCAACAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 39164 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCG 149 || ||||||||||||||||||||||| |||||||||||||| |||||||||||||||| Sbjct 39165 ATAAGTGGGTGAACAATCCAACGCTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCG 39224 Query 150 ACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 39225 ACATCGAAGGATCAAAAAGCAACGTCGCTATGGACGCTTGGCTGCCACAAGCCAGTTATC 39284 Query 210 CCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAG 269 |||||||||||||||||| |||||| | | | ||| | || | |||||||||||| Sbjct 39285 CCTGTGGTAACTTTTCTGACACCTCAAACTTGAAACCATCAAGGTTTTAAGGATCGATAG 39344 Query 270 GCCACACTTTCATGGTTTGTATT 292 ||||| ||||| ||| |||||| Sbjct 39345 GCCACGCTTTCGCGGTCTGTATT 39367 Score = 345 bits (382), Expect = 7e-93 Identities = 226/249 (91%), Gaps = 0/249 (0%) Strand=Plus/Plus Query 37 GTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 96 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 30955 GTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTG 31014 Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGA 156 ||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||| Sbjct 31015 GGTGAACAATCCAACACTTGGCGAATTCTGCTTCGCAATGATAGGAAGAGCCGACATCGA 31074 Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 31075 AGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGG 31134 Query 217 TAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACAC 276 ||||||||||| ||||||| || ||||| | | || |||||||||| |||||| | Sbjct 31135 TAACTTTTCTGACACCTCTTGCTGAAAATTCCTAAAAACAAAAGGATCGAGGGGCCACGC 31194 Query 277 TTTCATGGT 285 ||||| ||| Sbjct 31195 TTTCACGGT 31203 Score = 87.8 bits (96), Expect = 3e-15 Identities = 68/80 (85%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGAC-GGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| ||||||||||||||||||||||||||||||| Sbjct 29072 TACTGAGCAGGATTACTATCGCAACGACCGGTCATCAGTAGGGTAAAACTAACCTGTCTC 29131 Query 60 ATGACGGTCTAAACCCAGCT 79 | ||||| ||||||||| || Sbjct 29132 ACGACGGCCTAAACCCATCT 29151 >seq442 Length=105096 Score = 154 bits (170), Expect = 3e-35 Identities = 109/124 (88%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 74 CCAGCTCACGTTCCCTATTAGTGGGTGAA--CAATCCAACGCTTACCGAATTCTGCTTCG 131 ||||||||||| | |||||||||| | ||||||||| ||| |||||||||||||| Sbjct 53620 CCAGCTCACGTCGGCCGTTAGTGGGTGTAGACAATCCAACACTTGGCGAATTCTGCTTCG 53561 Query 132 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct 53560 CAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGC 53501 Query 192 TGCC 195 ||| Sbjct 53500 CGCC 53497 >seq1688 Length=11477 Score = 149 bits (164), Expect = 1e-33 Identities = 87/90 (97%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 35 CAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 94 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 8427 CAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAG 8368 Query 95 TGGGTGAACAATCCAACGCTTACCGAATTC 124 ||||||||||||||||||||| ||||||| Sbjct 8367 TGGGTGAACAATCCAACGCTTGGCGAATTC 8338 >seq1245 Length=56751 Score = 134 bits (148), Expect = 2e-29 Identities = 93/104 (89%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGAC-GGTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| || | |||| ||||||||||||||||||||||||||||||| Sbjct 44191 TACTGAGCAGGATTACTATCGCAACGACCGGTCATCAGTAGGGTAAAACTAACCTGTCTC 44250 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAAC 103 | |||||||||||||||||||||||||||||| ||||||||||| Sbjct 44251 ACGACGGTCTAAACCCAGCTCACGTTCCCTATAAGTGGGTGAAC 44294 >seq263 Length=872707 Score = 95.1 bits (104), Expect = 2e-17 Identities = 86/108 (80%), Gaps = 3/108 (3%) Strand=Plus/Plus Query 119 GAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCT 178 ||||||| ||||| |||||||||| || |||| || ||||||||| |||||||| || Sbjct 501774 GAATTCTTCTTCGTAATGATAGGAACAG---ACATTGAGGGATCAAAACGCAACGTCACT 501830 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCT 226 ||||| ||| | | | |||| ||| ||| |||||||||||||||| Sbjct 501831 ATGAATAATTGACAGGTATAAGCGAGTCATCACTGTGGTAACTTTTCT 501878 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854339534112