Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq4139 181 2e-43 >seq4139 Length=6164 Score = 181 bits (200), Expect = 2e-43 Identities = 177/228 (78%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 112 GGACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCG 171 |||| |||| | ||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct 4978 GGACCGTGTATGGTGGGTAGTTTGACTGGGGCGGTCGCCTCCTAAAGAGTAACGGAGGCG 5037 Query 172 CCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGT 231 | | | | || ||||| || ||||| | | || ||||||| |||| ||| || Sbjct 5038 CGCGATGGTAGGCTCAGAACGGTCGGAAATCGTTCGTCGAGTGCAATGGCATAAGCCTGC 5097 Query 232 TTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTG 291 ||||||| | || |||||| ||||| |||||||||||| | || |||||||| ||| Sbjct 5098 CTGACTGCAAGACTGACAAGTCGAGCAGAGACGAAAGTCGGTCATAGTGATCCGGTGGTC 5157 Query 292 CTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | | ||||| |||| |||||| ||||||||||| ||| | ||||||| Sbjct 5158 CCGCGTGGAAGGGCCATCGCTCAACGGATAAAAGGTACGCCGGGGATA 5205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982330475552