Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq4139 295 1e-77 >seq4139 Length=6164 Score = 295 bits (326), Expect = 1e-77 Identities = 270/338 (80%), Gaps = 20/338 (6%) Strand=Plus/Minus Query 1 CTTTACAATCCGAAGACCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCC 60 |||||||| || | | ||||| | ||| |||||||||| ||||||||||||||| ||||| Sbjct 1138 CTTTACAACCCTAGGGCCTTCAT-CACTCACGCGGCAT-GGCTGGATCAGGCTTGCGCCC 1081 Query 61 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAG 120 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct 1080 ATTGTCCAATATTCCCCACTGCTGCCTCCCGTAGGAGTCTGGGCCGTGTCTCAGTCCCAG 1021 Query 121 TGTGACTGATCATCCTCTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATTACCTCA 180 |||| ||||||||||||||||||||| || ||||||||||||||||||||| |||||||| Sbjct 1020 TGTGGCTGATCATCCTCTCAGACCAGCTATGGATCGTCGCCTTGGTGAGCCTTTACCTCA 961 Query 181 CCAACTAGCTAATCCGACCTAGGCTCAT-CTGATAGCGCAAGGCCCGA-AGGTCCCCTGC 238 ||||||||||||||| || ||||||| || | |||| | | | Sbjct 960 CCAACTAGCTAATCCAACGCGGGCTCATCCTTCT----------CCGATAAAT------C 917 Query 239 TTTCTCCCGTAGGACGTATGCGGTATTAGCGTCCGTTTCCGAACGTTATCCCCCACTACC 298 |||| || | || ||||| |||||||||| |||||| ||||| || | | Sbjct 916 TTTCGCCTCTCGGCCGTATTCGGTATTAGCACAAGTTTCCCTGAGTTATTCCGAAGAAAA 857 Query 299 AGGCAGATTCCTAGGCATTACTCACCCGTCCGCCGCTC 336 || ||||||| | || ||||||||||||| ||||||| Sbjct 856 GGGTAGATTCCCACGCGTTACTCACCCGTCTGCCGCTC 819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071924134560