Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq4139 356 8e-96 >seq4139 Length=6164 Score = 356 bits (394), Expect = 8e-96 Identities = 396/523 (76%), Gaps = 14/523 (3%) Strand=Plus/Minus Query 46 ACTTCCCGGCATTCGGAGTTTGGTTGATTTCGGTAAGCTTGTGGGCCCCC-TAGACCATC 104 ||| ||||| |||||||||||| || || ||||| ||| | |||| ||| |||| Sbjct 3813 ACTCCCCGGTATTCGGAGTTTGATTAGGATCAGTAAGACGGTGAGTCCCCATAGCCCATT 3754 Query 105 CAGTGCTCTACCTCCGGGAAGAAACACGCGACGCTGCACCTAAATGCATTTCGGGGAGAA 164 |||||||||||| ||||| | | ||||||| |||||||| |||||| |||||| Sbjct 3753 CAGTGCTCTACCCCCGGGGGTATTCGGTCGACGCTCTACCTAAATAGATTTCGCGGAGAA 3694 Query 165 CCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTCATCCCCTCAGTTT 224 ||||||||| | ||||||||||||||||||||||||| ||||| |||||||| || Sbjct 3693 CCAGCTATCTCCAAGTTTGATTGGCCTTTCACCCCTAGCCACAAGTCATCCCGATCTATT 3634 Query 225 TCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCAACCTGCCCATGGA 284 |||| | |||||||||||||||| || ||||| ||||||||||| ||||| Sbjct 3633 GCAACAGATATGGGTTCGGTCCTCCAGTACGTGTTACCGTACCTTCAACCTGCTCATGGC 3574 Query 285 TAGATCACTTCGCTTCGGGTCTTGATCGTGCCACTCATACGCCCTATTCGGACTCGCTTT 344 |||||||||| | ||||||||| || ||| | ||||||| ||| |||||||||| Sbjct 3573 TAGATCACTTGGTTTCGGGTCTAATCCGACGAACTGA-ACGCCCTGTTCAGACTCGCTTT 3515 Query 345 CGCTACGGCTACCCCACACGGGTTAACCT--CGCGACACAACGCAAACTCGCAGGCTCAT 402 ||||||| |||| || ||| |||| || | || || | | || |||| | | ||| Sbjct 3514 CGCTACGCCTACACCTACCGGCTTAAGCTTGCTCGTCAGA---CTAAGTCGCTGACCCAT 3458 Query 403 TCTTCAAAAGGCACGCCGTCACCTGGTACCTAAAAGGCACTTCAGCTCCGACGGATTGTA 462 | | ||||||| |||| |||||| | || | ||| ||||| || | ||||| Sbjct 3457 TATACAAAAGGTACGCTGTCACCCAGGAC------GAACCTTGGGCTCCAACTGTTTGTA 3404 Query 463 GGCACATGGTTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTC 521 |||| ||||||||||||| ||||||||||| | ||||| ||||||||||||||||| Sbjct 3403 GGCATTCGGTTTCAGGTACTGTTTCACTCCCCTCGTCGGGGTGCTTTTCACCTTTCCCTC 3344 Query 522 ACGGTACTTGTCCGCTATCGGTCACCAAGGAGTATTTAGGCTT 564 |||||||| || |||||||||||| | ||||| |||||||| Sbjct 3343 ACGGTACTGGTTCGCTATCGGTCATGCACGAGTACTTAGGCTT 3301 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817471368448