Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq4139 313 6e-83 >seq4139 Length=6164 Score = 313 bits (346), Expect = 6e-83 Identities = 327/416 (79%), Gaps = 14/416 (3%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| ||||| ||| | || || |||| | | |||||||||||||||| || ||| Sbjct 3655 CCACAAGTCATCCCGAT--CTATTGCAACAGATATGGGTTCGGTCCTCCAGTACGT-GTT 3599 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| ||||| |||||||| ||| || |||||| | ||||| |||||||| | || | Sbjct 3598 ACCGTACCTT-CAACCTGCTCAT-GGCTAGATCACTTGGTTT-CGGGTCTAAT-CCGACG 3543 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTTT 187 ||| ||||||| | ||||||||||| |||||||||| | |||| | |||||||| Sbjct 3542 AACTGAACGCCCTGTTCAGACTCGCTTT-CGCTACGCCTACACCTACCGGCTTAAGCTT- 3485 Query 188 GCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCA--ACAAAG 245 || | | | |||||||||||||||||||||||||||||||| |||||||| || || Sbjct 3484 GCTCGTCAGACTAAGTCGCTGACCCATTATACAAAAGGTACGCTGTCACCCAGGACGAAC 3425 Query 246 --TGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 |||||||| |||| ||||| |||| |||||||||| || ||||||||||||| ||| Sbjct 3424 CTTGGGCTCCAACTGTTTGTAGGCATTCGGTTTCAGGTACTGTTTCACTCCCCTCGTCGG 3365 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 ||| |||||| |||||||||||||||||| |||| |||||||||| || |||| |||| Sbjct 3364 GGTGCTTTTCACCTTTCCCTCACGGTACTGGTTCGCTATCGGTCATGCACGAGTACTTAG 3305 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 |||||| ||||| ||||| |||||||| |||| |||| ||| ||||||| Sbjct 3304 GCTTGGATCGTGGTCGACCCATGTTCAGACAGGATTTCACGTGTCCCGCCCTACTC 3249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241512131968