Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Onthophagus_20taurus_20[genbank_20GCA_5F000648695.1_202014-05-01] 7,077 sequences; 270,533,845 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq4139 217 3e-54 >seq4139 Length=6164 Score = 217 bits (240), Expect = 3e-54 Identities = 298/410 (73%), Gaps = 16/410 (4%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| ||| || |||| | |||| ||||| | Sbjct 4261 CGACTACGCCTTTCGGCCTCGCCTTAGGGGCCGGCTAACCCTGCTCAGATTAACTTTAAG 4202 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCAC-CCGTCACACGCTACTCATGCCT 119 | |||||||||||| |||||| | | || ||| || | || |||||||| | Sbjct 4201 CAGGAACCCTTGGACTTTCGGCGAGGGAGTCTCTCACTCCCTTTATCGTTACTCATGTCA 4142 Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAG---CTTCACCA-CTGAC 175 ||||||||||| | | ||||| | ||| | || | | |||||| || || Sbjct 4141 GCATTCTCACTTCCGATACCTCCAGGAT---GTCTCACGACTGTCCCTTCACAGGCTTAC 4085 Query 176 ACGACGCTCCCCTACCCAACCACACAGGTTG--CCACAGCTTCGGCGGATAACTTAAGCC 233 ||||||| ||||| | |||| | || |||||||||||| | || ||| |||| Sbjct 4084 GGAACGCTCCGCTACC-ACGCACATACGTGCATCCACAGCTTCGGTGTATGGCTTTAGCC 4026 Query 234 CCGCTACATTATCGGCGCGGAATCACTT-----GACCAGTGAGCTATTACGCACTCTTTC 288 ||| |||||| ||||||| | | ||| |||||||||||| |||||| ||||| Sbjct 4025 CCGGTACATTTTCGGCGCAAAGACCCTTATTTAGACCAGTGAGCTGTTACGCTTTCTTTA 3966 Query 289 AAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCA 348 || |||||||||||| |||||||| |||||| ||||| || ||||||| ||||||| Sbjct 3965 AATGATGGCTGCTTCTAAGCCAACATCCTGGCTGTCTGTGCCTTCCCACATCGTTTCCCA 3906 Query 349 CTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 || | || |||| ||| ||||||||| | |||||| ||||||||||| Sbjct 3905 CTTAACCATGACTTTGGGACCTTAGCTGGCGGTCTGGGTTGTTTCCCTCT 3856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177516661248